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Domain assignment for ENSCPOP00000011053 from Cavia porcellus 69_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000011053
Domain Number 1 Region: 127-246
Classification Level Classification E-value
Superfamily Eukaryotic type KH-domain (KH-domain type I) 1.31e-26
Family Eukaryotic type KH-domain (KH-domain type I) 0.000000366
Further Details:      
 
Weak hits

Sequence:  ENSCPOP00000011053
Domain Number - Region: 266-288
Classification Level Classification E-value
Superfamily Retrovirus zinc finger-like domains 0.000331
Family Retrovirus zinc finger-like domains 0.0042
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000011053   Gene: ENSCPOG00000012290   Transcript: ENSCPOT00000012406
Sequence length 645
Comment pep:novel scaffold:cavPor3:scaffold_42:5615575:5626499:-1 gene:ENSCPOG00000012290 transcript:ENSCPOT00000012406 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
PLDFPSKKRKRSRWNQDTMEQKTVIPGMPTVIPPGLTREQERAYIVQLQIEDLTRKLRTG
DLGIPPNPEDRSPSPEPIYNSEGKRLNTREFRTRKKLEEERHNLITEMVALNPDFKPPAD
YKPPATRVSDKVMIPQDEYPEINFVGLLIGPRGNTLKNIEKECNAKIMIRGKGSVKEGKV
GRKDGQMLPGEDEPLHALVTANTMENVKKAVEQIRNILKQGIETPEDQNDLRKMQLRELA
RLNGTLREDDNRILRPWQSSETRSITNTTVCTKCGGAGHIASDCKFQRPGDPQSAQDKAR
MDKEYLSLMAELGEAPVPASVGSTSGPTATPLASAPRPAAPANNPPPPSLMSTTQSRPPW
MNSGPSESRPYHGMHGGGPGGPGGGPHSFPHPLPSLTGGHGGHPMQHNPNGPPPPWMQPP
PPPMNQGPHPPGHHGPPPMDQYLGSTPVGSGVYRLHQGKGMMPPPPMGMMPPPPPPPSGQ
PPPPPSGPLPPWQQQQQQPPPPPPPSSSMASSTPLPWQQNTTTTTTSAGTGSIPPWQQQQ
AAAAASPGAPQMQGNPTMVPLPPGVQPPLPPGAPPPPPRSIECLLCLLSSPNSLCLSPNW
AARIPPRGGDGSSHESEDFPRPLVTLPGRQPQQRPWWTGWFGKAA
Download sequence
Identical sequences 10141.ENSCPOP00000018639 ENSCPOP00000018639 ENSCPOP00000011053

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