SUPERFAMILY 1.75 HMM library and genome assignments server

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Domain assignment for ENSCPOP00000013075 from Cavia porcellus 69_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000013075
Domain Number 1 Region: 1025-1074
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00000000113
Family Classic zinc finger, C2H2 0.047
Further Details:      
 
Domain Number 2 Region: 24-141
Classification Level Classification E-value
Superfamily SET domain 0.00000000115
Family Viral histone H3 Lysine 27 Methyltransferase 0.039
Further Details:      
 
Domain Number 3 Region: 329-381
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000000012
Family Classic zinc finger, C2H2 0.023
Further Details:      
 
Domain Number 4 Region: 1064-1111
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000177
Family Classic zinc finger, C2H2 0.038
Further Details:      
 
Weak hits

Sequence:  ENSCPOP00000013075
Domain Number - Region: 450-478
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000366
Family Classic zinc finger, C2H2 0.043
Further Details:      
 
Domain Number - Region: 1227-1248,1343-1367
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0122
Family Classic zinc finger, C2H2 0.068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000013075   Gene: ENSCPOG00000014509   Transcript: ENSCPOT00000014654
Sequence length 1610
Comment pep:novel scaffold:cavPor3:scaffold_25:19668615:19743321:-1 gene:ENSCPOG00000014509 transcript:ENSCPOT00000014654 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
LQNVPEPVAATETLAEVPEHVFRGLPEEVRLFPSAVDKTRIGVWATKPILKGKKFGPFVG
DKKKRSQVKNNVYMWEVYYPNLGWMCIDATDPEKGNWLRYVNWACSGEEQNLFPLEINRA
IYYKTLKPIAPGEELLVWYNGEDNPEIAAAIEEERASARNKRSSPKSRTGKKKSQENKNK
GNKPQDIQPKTSEPNFTPANMRDSADGPKEEEERPLAEAPEQPAVPQDVVSQDVLPELLI
PAPACESQPEPEGKQEATDCEANDQADMPNENSVKEPEIHCDEKPEDLFEETKSILNETP
EDASEVTPVIRIPETKEEVNGDVFETFMFPCQHCERKFTTKQGLERHMHIHMSTVNHAFK
CKYCGKAFGTQINRRRHERRHEAGLKRNPGATVQPSEDLADGRASGENVAPKDELSPPHL
GQDCLIPNSEKVSQETTHASVVEENGEVKELHPCKYCKKVFGTHTNMRRHQRRVHERHLI
PKGVRRKGGLLDEPQPPAEQAQPTPNVYVPSTEPEEEGEADDIYIMDISSNISENLNYYI
DGKIQTNNNTSNCDVIEMESNSADLYGINCLLAPVTVEITQNIKTTLVPVTDDLPKEPSS
STNCESKKRRTASPPVLPKIKTETDSDPTAPSCSLSLPLSISTTEAVSFHKEKSVYLSSK
LKQLLQTQDKLAPPAGISASEVPKLGRMCVSAPASMLAVTSSRFKRRTSSPPSSPQHSPA
LRDFGKPSEGKAGWSDTVLAPKKPKLESRSDSPAWSLSGREERETGSPPCFDEYKISKDW
AASSTFSNVCNQQPLDLSSGVKQKTEGTGKTPVQWESVLDLSVHKKPCDSEGKEFKENHS
AQPTSAVKKKKPTTCMLQKVLLNEYNGIDLPVESTPDVARSPSPCKSPEAQPDPDLSSDS
RFSAPAAESPDEVCPPSPTLQTPSQSSSQLPPLLVPTDPPSPLACPPVLTVAPEEPLLSA
ASPGPPTPPPPLSAVSSVVSSGDNLEASLPAITFKQEELENESLKAREEPQSTVGQDIVQ
ETFSKNFVCNVCESPFLSIKDLTKHLSVHAEEWPFKCEFCVQLFKDKSDLSEHRFLLHGV
GNIFVCSVCKKEFAFLCNLQQHQRDLHPDEVCTHHEFESGTLRPQNFTDPSKAQMEHMQG
LPADPLETSKEEEELNDSSEELYTTIKIMASGIKTKDPDVRLGLNQHYPSFKPPPFQYHH
RNPMGIGVTATNFTTHNIPQTFTTAIRCTKCGKGVDNMPELHKHILACASASDKKRYTPK
KNPVPLKQTVQPKNGVVVLDSSGKNAFRRMGQPKRLNFSVELSKMSPNKLKLNALKKKNQ
LVQKAILQKNKSAKQKADLKNASESSSHICPYCNREFTYIGSLNKHAAFSCPKKPLSPSR
KKVSHSAKKGGHSSSANSDKNSNNHRRRTADAEIKMQSTQAPLGKTRARSSGPAPAPLPS
SSFRSKQNVKFVASVKTKKPSSSSLRNSSPIRMAKITHAEGKKPKAVAKNHSAQLSSKTS
RNLHVRVQKSKAVLQSKSTLASKKRTDRFSVKSRERSGGPITRSFQLAAAADSSESRRED
SSAKQELKDFSYSLRLASRCPPPATPYITRQCRKAKAPAATQYQGPFLKE
Download sequence
Identical sequences ENSCPOP00000013075 ENSCPOP00000013075 10141.ENSCPOP00000013075

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