SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCPOP00000016694 from Cavia porcellus 69_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCPOP00000016694
Domain Number 1 Region: 37-101,202-310
Classification Level Classification E-value
Superfamily Calponin-homology domain, CH-domain 2.5e-24
Family Calponin-homology domain, CH-domain 0.0091
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000016694   Gene: ENSCPOG00000022528   Transcript: ENSCPOT00000026404
Sequence length 325
Comment pep:novel scaffold:cavPor3:scaffold_28:27644405:27662212:1 gene:ENSCPOG00000022528 transcript:ENSCPOT00000026404 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MEPEPLYNLLQLPKGVALASHSPVLPGGKKKYLPPASRKDPKFLELQKVLTEWINATLLP
EHIVVRSLEEDMFDGLVLHHLFRELSVPTLEEEVSAMSQVSQXGLEDSGVTGVPGVTRLL
RDRAKGNPRAVLGAQGPKPSAVQSSAARTSKGPGWPKKPESEAVGAQSLSHKATFCLQSL
RSPSDAAAGDVFDELFKLAPEKVGTVKEAIMSFVNQKLERLGLSVQDLDTQFADGVILLL
LIGQLEGFFLHLKEFHLTPRSPAEMLHNVTLALTLLKDEGLLSHPVSPEDIVNKDAKSTL
RVLYSLFCKHKLKVDKDGRPQAPTN
Download sequence
Identical sequences ENSCPOP00000016694 10141.ENSCPOP00000016694 ENSCPOP00000016694

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]