SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCPOP00000018675 from Cavia porcellus 69_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCPOP00000018675
Domain Number 1 Region: 2-173
Classification Level Classification E-value
Superfamily vWA-like 2.04e-24
Family Integrin A (or I) domain 0.0000759
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000018675   Gene: ENSCPOG00000022557   Transcript: ENSCPOT00000022597
Sequence length 321
Comment pep:novel scaffold:cavPor3:scaffold_62:5110581:5113061:-1 gene:ENSCPOG00000022557 transcript:ENSCPOT00000022597 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
RSDFVGNNWYQIYRFMNNMMRRLTDPNLRVSFITYSCKGNIILPLTSDRQEIQRGLDRLQ
YTVPAGSHFLEEGIHKANMQIQNVNFKSGGASKRPATIIAMVGSTLKQEVLNEAKKHADR
SRSLGANIYTVGFGGADRSELMQLSGLPENVLEVQHGVEGLPNILEPVSNLLCMEIISSV
TVLSTHCPGEGNYTYTATLNEEYQIGPKEEILCRFTFNSSSWVEHNPSKVEGFAIRCPLP
KTDRAGRKYFVSVSLDRGVTFLDLRFDIISIDCEVMSNLFLVPLGLFLLLALLLLCCLHQ
LCRPKRRKPPPPPPPEPEVSG
Download sequence
Identical sequences ENSCPOP00000018675 ENSCPOP00000014476 10141.ENSCPOP00000014476

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]