SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSTOP00000018578 from Ictidomys tridecemlineatus 69_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSTOP00000018578
Domain Number 1 Region: 11-141
Classification Level Classification E-value
Superfamily POZ domain 5.57e-26
Family BTB/POZ domain 0.00083
Further Details:      
 
Domain Number 2 Region: 360-411
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 4.97e-19
Family Classic zinc finger, C2H2 0.0076
Further Details:      
 
Domain Number 3 Region: 396-448
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000000125
Family Classic zinc finger, C2H2 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSTOP00000018578   Gene: ENSSTOG00000020089   Transcript: ENSSTOT00000027862
Sequence length 539
Comment pep:novel scaffold:spetri2:JH393390.1:4557640:4559519:1 gene:ENSSTOG00000020089 transcript:ENSSTOT00000027862 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MGSPEDDLIGIPFPDHSSELLSCLNEQRQLGHLCDLTIRTQGLEYRTHRAVLAACSHYFK
KLFTEGGGGAVMGPGGGGTAAGGAGAGVCELDFVGPEALGALLEFAYTATLTTSSANMPA
VLQAARLLEIPCVIAACMEILQVSGLEAPSPDEDDCERARQYLEAFATTTTSGVPNGEDS
PPQGPLLPPPPPPPRPTARRSRKPRKAFLQTKGARANHLVPEAPTVPTHPLTYEEEEAPG
RGGSSGGSGLADSYSPPTGVASPTEGPLSYDTYEGEEEEEELVYPPVYGPAQSGGPPLSP
EELGSDEDAIDPDLMVYLSSLHQDALAPGLDGQDKLVRKRRSQMPQECPVCHKIIHGAGK
LPRHMRTHTGEKPFACEVCGVRFTRNDKLKIHMRKHTGERPYSCPHCPARFLHSYDLKNH
MHLHTGDRPYECHLCHKAFAKEDHLQRHLKGQNCLEVRTRRRRKDDAPPHYPPPSTASPS
PAGLDLSNGHLDTFRLSLARFWEQSAPTGPPVSTPGPPDDEEEEGAPTTPQAEGAMESS
Download sequence
Identical sequences I3N2I2
ENSSTOP00000018578 XP_005331374.1.77405 XP_021586188.1.77405 ENSSTOP00000018578

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]