SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for gi|325109914|ref|YP_004270982.1| from Planctomyces brasiliensis DSM 5305

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  gi|325109914|ref|YP_004270982.1|
Domain Number 1 Region: 51-216
Classification Level Classification E-value
Superfamily Thioredoxin-like 8.46e-27
Family Glutathione peroxidase-like 0.0014
Further Details:      
 
Domain Number 2 Region: 329-450
Classification Level Classification E-value
Superfamily PHM/PNGase F 1.94e-20
Family Peptidylglycine alpha-hydroxylating monooxygenase, PHM 0.01
Further Details:      
 
Domain Number 3 Region: 469-586
Classification Level Classification E-value
Superfamily PHM/PNGase F 0.000000000000262
Family Peptidylglycine alpha-hydroxylating monooxygenase, PHM 0.022
Further Details:      
 
Domain Number 4 Region: 620-676
Classification Level Classification E-value
Superfamily EF-hand 0.00000022
Family Calmodulin-like 0.05
Further Details:      
 
Domain Number 5 Region: 229-306
Classification Level Classification E-value
Superfamily Cytochrome c 0.0000662
Family monodomain cytochrome c 0.041
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) gi|325109914|ref|YP_004270982.1|
Sequence length 680
Comment alkyl hydroperoxide reductase/ thiol specific antioxidant/ Mal allergen [Planctomyces brasiliensis DSM 5305]
Sequence
MTDVRNTEMLSDSTATSMKRGLVLAAALLLGISTLPAIAAAESTAVKLQQMSLPDAAGKV
TPLFPKEQQAEVTIVCFLGSECPLAQLYGPRLQKLASEYEAGQVRVIGINSNLQDSREDV
TEFVKRHQLQYSVFKDYDHAVADLFEAKRTPEVLLLNRDLEVIYRGRIDDQYTPGTIKSA
PDQHDLKNAIDDQLAGREIQTPKTEPVGCLIGRAYEGEVTTKLTYCKEIARILQKHCVEC
HRPAEIGPFSLTNYDEVIGWGEMMLETVQQGRMPPWHANPAHGQFANSRRMSDEEKAQLR
DWVKGGMPYGNPKELPEPVSYVEGWQLDRKPDLVLDMGKSPFKVPAEGVVEYQYFVVDPG
FEEDRWITGAQVLPGNRAVVHHCIVFVRPPDGEKSRGLGFVAAYVPGQRSTMLPAGCGRR
IPAGSRLVFQMHYTPTGTPQEDLSKLGLLFGNSEDIDSEVYTLPAINRNFEIPPQAADYA
VSGETTRVPQNARMLALSPHMHYRGKSFRAVAKREDGRDILLDVPYYDFNWQHVYEMKSP
LQLDGIKALEFTATFDNSSENPFNPDPSQYVTWGDQTWEEMAIAFFEIALPRGEKPVYAA
APQSEQVDEQAMAKQQAADKAAEDRFVSDFFSRFDTDGDGIVRRDEMPLAQRRYGFRKLD
RNDDDRLDRDEIAAQYRERR
Download sequence
Identical sequences F0SL77
gi|325109914|ref|YP_004270982.1| WP_013629680.1.67628

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]