SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSTOP00000005141 from Ictidomys tridecemlineatus 76_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSTOP00000005141
Domain Number 1 Region: 174-277
Classification Level Classification E-value
Superfamily POZ domain 3.53e-18
Family Tetramerization domain of potassium channels 0.03
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSTOP00000005141   Gene: ENSSTOG00000005753   Transcript: ENSSTOT00000005749
Sequence length 464
Comment pep:known_by_projection scaffold:spetri2:JH393338.1:5132091:5166176:1 gene:ENSSTOG00000005753 transcript:ENSSTOT00000005749 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPKDADLSFSAALFERAESLYTLISTFFSCFCVSTLAYAKGSTPSRVAKGGVDHTKMSLH
GASGGHERSRDRRRSSDRSRDSSHERAESQLTPCIRNVTSPTRQHHVEREKDHSSSRPSS
PRSQKASPNGSISSAGNSSRNSSQSSSDGSCKTSGEMVFVYENAKEGARNLRTSERVTLI
VDNTRFVVDPSIFTAQPNTMLGRMFGSGREHNFTRPNEKGEYEVAEGIGSTVFRAILDYY
KTGIIRCPDGISIPELREACDYLCISFEYSTIKCRDLSALMHELSNDGARRQFEFYLEEM
ILPLMVASAQSGERECHIVVLTDDDVVDWDEEYPPQMGEEYSQIIYSTKLYRFFKYIENR
DVAKSVLKERGLKKIRLGIEGYPTYKEKVKTRPGGRPEVIYNYVQRPFIRMSWEKEEGKS
RHVDFQCVKSKSITNLAAAAADIPQDQLVVMHPTPQVDELDILP
Download sequence
Identical sequences ENSSTOP00000005141 ENSSTOP00000005141 XP_013214750.1.77405

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]