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Domain assignment for ENSSTOP00000005552 from Ictidomys tridecemlineatus 76_2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSTOP00000005552
Domain Number 1 Region: 508-561
Classification Level Classification E-value
Superfamily RING/U-box 0.00000000219
Family RING finger domain, C3HC4 0.014
Further Details:      
 
Weak hits

Sequence:  ENSSTOP00000005552
Domain Number - Region: 299-353
Classification Level Classification E-value
Superfamily Rad50 coiled-coil Zn hook 0.00119
Family Rad50 coiled-coil Zn hook 0.0087
Further Details:      
 
Domain Number - Region: 450-514
Classification Level Classification E-value
Superfamily Bacterial exopeptidase dimerisation domain 0.00607
Family Bacterial exopeptidase dimerisation domain 0.0055
Further Details:      
 
Domain Number - Region: 211-250
Classification Level Classification E-value
Superfamily Rad50 coiled-coil Zn hook 0.0745
Family Rad50 coiled-coil Zn hook 0.018
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSTOP00000005552   Gene: ENSSTOG00000006201   Transcript: ENSSTOT00000006209
Sequence length 571
Comment pep:known_by_projection scaffold:spetri2:JH393284.1:25672183:25893586:1 gene:ENSSTOG00000006201 transcript:ENSSTOT00000006209 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MDLHRAAFKMENSSYLPNPLASPALMVLASTAEASRDASIPCQQPRPFGVPVSVDKDVHI
PFTNGSYTFASMYHRQGGVPGTFANRDFPPSLLHLHPQFAPPNLDCTPISMLNHSGVGAF
RPFASTEDRESYQSAFTPAKRLKNCHDTESPHLRFSDADGKEYDFGTQLPSSSPGSLKVD
DTGKKIFAVSGLISDREASSSPEDRNDRCKKKAAALFDSQAPICPICQVLLRPSELQEHM
EQELEQLAQLPTSKNSLLKDAMAPGTPKSLLLSASIKREGESPTASPHSSATDDLHHSDR
YQTFLRVRANRQTRLNARIGKMKRRKQDEGQVCPLCNRPLAGSEQEAVDIEHENSNRFEE
YEWCGQKRIRATTLLEGGFRGSGFVMCSGKENPDSDADLDVDGDDTLEYGKPQYTEADVI
PCTGEEPGEAKEREALRGAVLNGGPPSTRITPEFSKWASDEMPSTSNGESSKQEAMQKTC
KNSDIEKITEDSAVTTFEALKARVRELERQLSRGDRYKCLICMDSYSMPLTSIQCWHVHC
EECWLRTLGAKKLCPQCNTITAPGDLRRIYL
Download sequence
Identical sequences ENSSTOP00000005552 ENSSTOP00000005552

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