SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSSTOP00000007046 from Ictidomys tridecemlineatus 76_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSSTOP00000007046
Domain Number 1 Region: 64-158
Classification Level Classification E-value
Superfamily Multidrug resistance efflux transporter EmrE 0.0000000314
Family Multidrug resistance efflux transporter EmrE 0.016
Further Details:      
 
Domain Number 2 Region: 214-309
Classification Level Classification E-value
Superfamily Multidrug resistance efflux transporter EmrE 0.000000123
Family Multidrug resistance efflux transporter EmrE 0.025
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSTOP00000007046   Gene: ENSSTOG00000007868   Transcript: ENSSTOT00000007873
Sequence length 322
Comment pep:known_by_projection scaffold:spetri2:JH393300.1:11871706:11878129:1 gene:ENSSTOG00000007868 transcript:ENSSTOT00000007873 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAASKSLVPDRLRLPLCFLGVFVCYFYYGILQEKITRGKYGEGAKQETFTFALTLVFIQC
VINAVFAKILIQFFDTARVDRTRSWLYAACSLSYLGAMVSSNSALQFVNYPTQVLGKSCK
PIPVMLLGVTLLKKKYPLAKYLCVLLIVAGVALFMYKPKKVVGMEEHTIGYGELLLLLSL
TLDGLTGVSQDHMRAHYQTGSNHMMLNINLWSTLLLGAGILFTGELWEFLSFAERYPIII
YNILLFGLTSALGQSFIFMTVVYFGPLTCSIITTTRKFFTILASVILFANPISPMQWVGT
VLVFLGLGLDAKFGKGTKKTTH
Download sequence
Identical sequences I3MAL1
ENSSTOP00000007046 ENSSTOP00000007046

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]