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Domain assignment for ENSSTOP00000017221 from Ictidomys tridecemlineatus 76_2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSTOP00000017221
Domain Number 1 Region: 262-476
Classification Level Classification E-value
Superfamily L domain-like 5.53e-33
Family Internalin LRR domain 0.041
Further Details:      
 
Domain Number 2 Region: 761-908
Classification Level Classification E-value
Superfamily Toll/Interleukin receptor TIR domain 1.57e-29
Family Toll/Interleukin receptor TIR domain 0.00037
Further Details:      
 
Domain Number 3 Region: 49-340
Classification Level Classification E-value
Superfamily L domain-like 0.00000000000000884
Family Ngr ectodomain-like 0.019
Further Details:      
 
Domain Number 4 Region: 493-690
Classification Level Classification E-value
Superfamily L domain-like 0.000000000125
Family Ngr ectodomain-like 0.026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSTOP00000017221   Gene: ENSSTOG00000027584   Transcript: ENSSTOT00000020776
Sequence length 913
Comment pep:novel scaffold:spetri2:JH393687.1:168011:172826:1 gene:ENSSTOG00000027584 transcript:ENSSTOT00000020776 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSKMERRLVSAVLPLLLLDLMDCDLMSQAWTVPDCTIADSSLLSNLSFYIPFCPLAPGLH
IFASCSNVTDLTQTLRAVPQDIQALCLQGMVPVLPANAFGHSPFLQLLRLQLGTLKIISE
AFQGLNRLQYLSFEHHAPCCLSLFLPPDALVPLTFLSSLSFQGYCLNYSQNIQLPILRHL
TLGHSCLIELQELQVLFSNLVLSFSPTAIPRPWSSFLEVLDLSYNLKLNQAGVRALNGLQ
LHSLRLDGTPLNALGLLGSGLLHLDFLSLVGTGMEKLPGKCQLRALDLGRNRIQNIEDGD
LSCCSLEHLSLYSNGLKLLPIKFLNALPQLQSLNLSMNKLGPALVLPDGLVSTNLRVLDL
SNNELCVLPYGAFSFIPQLEKLWLSGNNISNLSSESLEGLKQLKTLDLSWNKIKVLKPDW
LSFLPALTSLNLLGTYLSHIPGKELQGPQRLSHLQLGSLQMLDFYPPWPLALLSLEIWAE
TGIWFNNFNEDPFLFLEKLILQTSKVVLSPYNTSVHFPSLRHLTLRGVSFFGFSSQQSQR
SFPQFPVLEHLHFWSDYGSTENLQLFGMPKLRELGLGDLNFHYESRSTKLELVLKEVPQL
QVLALSHLNLGNLSMSSFRDLDHLQLLLFNSEWTLGLDSNLQELIPQMPQYVYFSDVTFT
CQCESFWVGPWATQAPNTFVYGLEKSICMANASDYSKTPLLSFLSHQCARDLEFQGFLAS
FTLVLLFSILVLLGCPKWSWLHHLRTLFHVWWWKLCGRGPRSQFHYDVFISYCEQDQDWV
LEELVPTLEKSPPAAGEGLRLCLPERDFGVGQDRLDALVASMENCRAILCVLSNKALGSP
QCHLELRLATYHLVARPGTACLLFLEPIDGRKLRLTRWLQKEDYFDLPQGRVEWDVFCEQ
LRKRLRKAGQERD
Download sequence
Identical sequences ENSSTOP00000017221 ENSSTOP00000017221

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