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Domain assignment for ENSSTOP00000022263 from Ictidomys tridecemlineatus 76_2

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSSTOP00000022263
Domain Number 1 Region: 628-983
Classification Level Classification E-value
Superfamily DNA/RNA polymerases 2.56e-52
Family Reverse transcriptase 0.0023
Further Details:      
 
Domain Number 2 Region: 415-514
Classification Level Classification E-value
Superfamily Acid proteases 0.00000394
Family Retroviral protease (retropepsin) 0.033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSSTOP00000022263   Gene: ENSSTOG00000020179   Transcript: ENSSTOT00000029033
Sequence length 1360
Comment pep:known_by_projection scaffold:spetri2:JH393414.1:4649244:4653326:-1 gene:ENSSTOG00000020179 transcript:ENSSTOT00000029033 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MIEPSEDSFETMMERKNPSSKQMESSEGSSNTTMETPGSGAQAAAAGPSSGPAQEREEPP
SGSLQEMKELPIDLLQDMEEPSSGPHKEIEDPPNDLLQDLEESCYGSHQAVGDPLKETSE
RMREASVNPSGAQGKREAGNTDLKESAKKENPEEENQTESSPAEIMTMMRSIISLYFRMQ
DLKEQQRVAEEILVRGINAGRLPAPKRFSGDRREYHEFIVLCQLILQSYPRMFYSDRLRV
KYVICHLSGLALEWAKALLQQNSPLMGDFPAFLEAMSEVFEYRQTLRVAEEAMFNIRQGN
RCATDYINEFQSLVPTLGWPDEVLQAHLCQGLNEDIRHYLFRVPQPDSLDSLIVVILQIE
DKLAERRAMLRLPPEARPRNLTWIDSPAPEKWMVSSWLPSEFHPAINRAHLFLLLLVRVN
PYHSVAVQALVDSGAEGNFMDEKFAQEHYVELYEKPYPQSIQTVDGSLIGNEPIWLYTEP
LVCIHQNHQESIEFDIVPSPNFSVVLGINWLRIHAPEVDWIKGRCTFHSPYCLKNCFRPP
PPCIALERHSISLLPGLPHPYSDLADVFNPKEADDETSDQPSSDGSDDLSESEPSELQQA
GDSDHSETFYECPSTAPWEPVGARMQEEARQQEEFWELQDMLTDRQDYIQMIPELFDQLH
GAAWFTKLELRGTIVEGSMSAHRTEETWKAAFGLELQDMKSYQPFALSPDPIIPQSVIHF
ILKDMLGFFVLSYGQEVLVYSMCQEEHLQHVRQVLVRFRHHNVYCSLDKSQFHRQTAEIL
GFVVSPKGVKLNKNIMNIITGHPTPVNKKSLRSLIEFVFPYRHFVERFAIIAEPLVRQVL
STQPFYWGEEEQEAFECLKRAFRKAPMLYHPRPQNQFYLETGIYRTALYTSLIQIDDQTG
KRVTCAFYSRNLSPIEVEYPLVEMRVLPIRAAFMVWCRYLENTEEPIMILLNTEDLASLN
NDRLTVLLPGHWVFFFSHFNFDVMELPEQDGGRPLTPVRNRGRQGLRGRATRPVLLYATR
GSPRDQTIESEEEENGHEPDQDEFNEQALQQELLAMIPIDQILNSFLAHFSMAQIRAVIL
HFFRGLLYWKNLLAMAAVLVLMRVRQCPALLPAPTMAVARPQPRRSLRLILDSTLIASSS
MATAIAQLLTQMPPLVGANTMPAQEMAELFLGPRRWQRNALHPQTTGGLRFTPGFWLTLC
EFFGVRVTPPEGGRPAPRQNRYLELHVVGDEDVVLREALQDDLQRYRQCGLHDGLQDTSQ
DAQDNDAQEALPTQTAGALTLRPRNLMDPEVLDFLQNRLLHVRGADGRLTLLSREQVAQA
LTRFLSMTYRQAPPAPAAGHQPREPASLEELPDLEDADLD
Download sequence
Identical sequences ENSSTOP00000022263 ENSSTOP00000022263 XP_005333978.1.77405

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