SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGACP00000002175 from Gasterosteus aculeatus 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGACP00000002175
Domain Number 1 Region: 211-268,303-508
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 3.28e-75
Family Nuclear receptor ligand-binding domain 0.00000000897
Further Details:      
 
Domain Number 2 Region: 107-191
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 1.53e-27
Family Nuclear receptor 0.00017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGACP00000002175   Gene: ENSGACG00000001665   Transcript: ENSGACT00000002181
Sequence length 510
Comment pep:known_by_projection scaffold:BROADS1:scaffold_27:4856585:4866605:1 gene:ENSGACG00000001665 transcript:ENSGACT00000002181 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MVDTQQLLAWPVGFSLSAVELSELGDGSHSLDMKHLSTLDYAGLAYDPSPCQGEEQLTHM
DYANMHSYRMEPDTHNLIKLEPASPPQYSDNHVFSKLQDEASPAALNIECRVCGDKASGF
HYGVHACEGCKGFFRRTIRLKLVYDHCDLHCRIHKKSRNKCQYCRFQKCLNVGMSHNAIR
FGRMPQAEKEKLLAEFSSDVVHMHPEAADLRALSRHLYEAYLKNFPLTKVKARAILSGKT
GDNVPFVIHDMKSLMEGEQFINCKQIPIQEQHSSALTAGLEEIIGAYQGPEYGFLGMGMN
VSGQPPPDALELRFFHSCQSRSAEAVREVTEFAKSIPGFIDLDLNDQVTLLKYGVIEVLT
IMMAPLMNKDGTLISYGQIFMTREFLKSLRKPFGQMMEPKFDFSVKFNILELDDSDMALF
LAVIILSGDRPGLLNVKPIEQLQETVLHSLELQLKLNHPDCLQLFAKLLQKMTDLRQIVT
DHVHLIQLLKKTEVDMCLHPLLQEIMKDLY
Download sequence
Identical sequences G3NA33
69293.ENSGACP00000002175 ENSGACP00000002175 ENSGACP00000002175

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]