SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGACP00000003460 from Gasterosteus aculeatus 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGACP00000003460
Domain Number 1 Region: 23-139
Classification Level Classification E-value
Superfamily Thyroglobulin type-1 domain 5.76e-16
Family Thyroglobulin type-1 domain 0.0038
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGACP00000003460   Gene: ENSGACG00000002632   Transcript: ENSGACT00000003472
Sequence length 307
Comment pep:known_by_projection group:BROADS1:groupVI:1052937:1055800:1 gene:ENSGACG00000002632 transcript:ENSGACT00000003472 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MKMWIVLVLVAFAAGASAQSCSCETMKWATCDDAPCACNILTGDNNRQPLNCTSLIPKCW
LMKAEMYRAKKGLDTRTGGKPVESAFVDNDGIYDPECQSDGKFKARQCNNTEECWCVNSA
GVRRTDKGDKTLVCEKLVETHWLRLQLTHKALTTPLKAAELKDAIADAINRRYTNFDRKL
VDNVEYDADSRLIVVDVKKAEGERQTELANMAYYMEKDVKVSPLFKNPNKFAPVIGGQTL
EMENILVYYVDEEPPTFTMKNLSAGIIAVIVVVVLAVVAGLLVLFFARKRQNQKYNKAQQ
REMDPIS
Download sequence
Identical sequences G3NDR0
ENSGACP00000003460

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]