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  Home > Genomes > Gasterosteus aculeatus 76_1 > ENSGACP00000004861

Domain assignment for ENSGACP00000004861 from Gasterosteus aculeatus 76_1

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSGACP00000004861
Domain Number 1 Region: 882-1054
Classification Level Classification E-value
Superfamily Fibronectin type III 3.33e-18
Family Fibronectin type III 0.0021
Further Details:      
 
Domain Number 2 Region: 1072-1154
Classification Level Classification E-value
Superfamily Fibronectin type III 0.000000000000552
Family Fibronectin type III 0.0033
Further Details:      
 
Domain Number 3 Region: 274-316
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000226
Family EGF-type module 0.0068
Further Details:      
 
Domain Number 4 Region: 764-807
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000714
Family EGF-type module 0.0085
Further Details:      
 
Domain Number 5 Region: 553-591
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000357
Family EGF-type module 0.0051
Further Details:      
 
Domain Number 6 Region: 725-762
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000357
Family EGF-type module 0.0067
Further Details:      
 
Domain Number 7 Region: 349-387
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000432
Family EGF-type module 0.0072
Further Details:      
 
Domain Number 8 Region: 592-630
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000466
Family EGF-type module 0.0061
Further Details:      
 
Domain Number 9 Region: 311-355
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000000636
Family EGF-type module 0.0059
Further Details:      
 
Domain Number 10 Region: 670-726
Classification Level Classification E-value
Superfamily Complement control module/SCR domain 0.000000000639
Family Complement control module/SCR domain 0.0014
Further Details:      
 
Domain Number 11 Region: 516-550
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000857
Family EGF-type module 0.0069
Further Details:      
 
Domain Number 12 Region: 1281-1317
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000508
Family EGF-type module 0.012
Further Details:      
 
Domain Number 13 Region: 802-844
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000067
Family EGF-type module 0.0082
Further Details:      
 
Domain Number 14 Region: 234-279
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000389
Family EGF-type module 0.0088
Further Details:      
 
Domain Number 15 Region: 842-879
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000456
Family EGF-type module 0.0061
Further Details:      
 
Domain Number 16 Region: 438-469
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000647
Family EGF-type module 0.026
Further Details:      
 
Weak hits

Sequence:  ENSGACP00000004861
Domain Number - Region: 395-433
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0559
Family EGF-type module 0.019
Further Details:      
 
Domain Number - Region: 470-497
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0897
Family EGF-type module 0.033
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGACP00000004861   Gene: ENSGACG00000003698   Transcript: ENSGACT00000004875
Sequence length 1380
Comment pep:known_by_projection group:BROADS1:groupVIII:1762207:1782279:1 gene:ENSGACG00000003698 transcript:ENSGACT00000004875 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MGDAETIAQDDGGSRLVEISVAFPFFGDKHTGLYVNNNGLVSFLREVSQFTPVAFPIAGD
RRVVAPFWADVDNRRAGRVFYRESREPSILSRASGDVNAYFSEFPRFNATWVLISTWHQV
TFFGGNSLTPVNTFQAVLITDGDLSFTIFQYNNITWTTGMHVSSGGNPAGLGGIAAQAGF
NAGDGKRYFNIPGSRTADVVNVEGTTNVGYPGKWVFRIDDANVEVGSCNDSASVCPHLRP
CLNGGQCIDDCVTGNPSFSCSCLAGFTGRRCQIDVNECASRPCQNGGTCGDQINGFLCHC
PPGYTGSQCETDVDECKDKPCLNNALCVQGTGGFTCVCEPGYTGVLCETDINECEPQPCL
GGGECVDQVANFTCVCPAAFTGELCQTGDFTLTAACEEDGDCREHRVCGDAGSGASNCTC
APGFYGDQCESEITKECLCQNGGVCVDINGTCECPSGYTGLYCQFEVTQTPCSNSRTCPD
GGPCLEYGGTYLCTCQTSAAELDHKDFYPYVQPRSACDSSPCLNGGYCYERDGGYTCECK
YGYRGKHCEKVRLNTCASGPCRNGGSCKEEAGSYRCVCPYRFTGKHCEVGKPDPCASSPC
RNGGTCFHYIGKYKCECTEAFSGRHCEISRTSLQAVAVCSWMSSGVRELASQCGRADVNN
VFVFLSELGCGPPPQVKNAEVQFSSTTTGSMAVYICHSGFRSVPRATQSICGIQGDWSQP
PVCEEVNECLSQPCLNGGTCRNQVGSHQCECADGFSGSRCQTADIKTCLSEPCEHGGTCE
DRPGSYLCHCSQGFKGQNCEMEQDGCESGPCLNGGVCRGYRRNYLCSCKGGFFGDQCQML
ENPCVLQPCGNRGLCRSDKRGNYNCFCRVGHTGKDCEKDLLPPSGLHVLRVEENEVELRW
DEPEASHSPVSGFLVTYAPLGRSDPKSDLLERRQSSHVMRGLVPGMLYNISTFSIKRNTD
SNDNSQPATALIRTRPPPAEQLQAVNVSSSQVWLSWLVQAAHHAAVSRVHVSLTPADGGE
ARTAVLNASATEHTFSSLVPGQMYTVDVMTQSGIRPDEFPSTSHSAGPLQFWTRPLPPQN
LSLSHVTTNSALISWSRHPRNVPDGFVVNVTRGLNTRSRFLPNGRLGSYTLRELTPGQNY
YVALTAVRSTGQEQIHSFPQHLAFATLPMGARSGRRERPSGTGPGPQVVRTLPPSQPQHR
GGTTETENSDELPSQRCRYTELIDRRGKITAKFTHTPRKAVRHRTRPEPATRLEKIEETT
NKISLALEIQEGLRTKPALPQDCRGLPCHNGGTCVSQGDSFVCDCAAEFKGRQCELLCQR
VPHPCTRLYSETKSVPVWEDGVCHYLYKRTYKVQQDVCYREICEATPPKKSQVRRTNRQQ
Download sequence
Identical sequences G3NHQ1
ENSGACP00000004861 69293.ENSGACP00000004861 ENSGACP00000004861

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Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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