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  Home > Genomes > Gasterosteus aculeatus 76_1 > ENSGACP00000010002

Domain assignment for ENSGACP00000010002 from Gasterosteus aculeatus 76_1

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSGACP00000010002
Domain Number 1 Region: 1238-1503
Classification Level Classification E-value
Superfamily YWTD domain 6.41e-53
Family YWTD domain 0.00000214
Further Details:      
 
Domain Number 2 Region: 1858-2094
Classification Level Classification E-value
Superfamily YWTD domain 3.79e-44
Family YWTD domain 0.0000168
Further Details:      
 
Domain Number 3 Region: 2993-3248
Classification Level Classification E-value
Superfamily YWTD domain 1.15e-42
Family YWTD domain 0.0000202
Further Details:      
 
Domain Number 4 Region: 511-750
Classification Level Classification E-value
Superfamily YWTD domain 2.62e-42
Family YWTD domain 0.0000081
Further Details:      
 
Domain Number 5 Region: 1553-1807
Classification Level Classification E-value
Superfamily YWTD domain 1.83e-39
Family YWTD domain 0.0000479
Further Details:      
 
Domain Number 6 Region: 2166-2433
Classification Level Classification E-value
Superfamily YWTD domain 2.62e-34
Family YWTD domain 0.0000776
Further Details:      
 
Domain Number 7 Region: 226-443
Classification Level Classification E-value
Superfamily YWTD domain 1.2e-32
Family YWTD domain 0.0000983
Further Details:      
 
Domain Number 8 Region: 3889-4154
Classification Level Classification E-value
Superfamily YWTD domain 1.96e-30
Family YWTD domain 0.0000655
Further Details:      
 
Domain Number 9 Region: 47-62,91-164,448-495
Classification Level Classification E-value
Superfamily Growth factor receptor domain 9.42e-17
Family Growth factor receptor domain 0.017
Further Details:      
 
Domain Number 10 Region: 3748-3864,4146-4213
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000000424
Family Growth factor receptor domain 0.011
Further Details:      
 
Domain Number 11 Region: 2915-2985,3241-3302
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000895
Family Growth factor receptor domain 0.015
Further Details:      
 
Domain Number 12 Region: 858-901
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000183
Family LDL receptor-like module 0.00067
Further Details:      
 
Domain Number 13 Region: 900-941
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000183
Family LDL receptor-like module 0.00093
Further Details:      
 
Domain Number 14 Region: 1152-1232,1503-1547
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.000000000267
Family Growth factor receptor domain 0.01
Further Details:      
 
Domain Number 15 Region: 2737-2773
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000353
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 16 Region: 3330-3374
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000602
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 17 Region: 3455-3491
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000956
Family LDL receptor-like module 0.00087
Further Details:      
 
Domain Number 18 Region: 944-980
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000144
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 19 Region: 822-860
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000157
Family LDL receptor-like module 0.00078
Further Details:      
 
Domain Number 20 Region: 3413-3449
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000196
Family LDL receptor-like module 0.00081
Further Details:      
 
Domain Number 21 Region: 2868-2909
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000236
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 22 Region: 3573-3610
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000275
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 23 Region: 2658-2694
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000301
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 24 Region: 3612-3656
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000034
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 25 Region: 1029-1067
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000367
Family LDL receptor-like module 0.00058
Further Details:      
 
Domain Number 26 Region: 3533-3568
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000367
Family LDL receptor-like module 0.00099
Further Details:      
 
Domain Number 27 Region: 1813-1862
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000441
Family EGF-type module 0.011
Further Details:      
 
Domain Number 28 Region: 3372-3409
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000576
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 29 Region: 3490-3530
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000798
Family LDL receptor-like module 0.00083
Further Details:      
 
Domain Number 30 Region: 983-1016
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000929
Family LDL receptor-like module 0.00031
Further Details:      
 
Domain Number 31 Region: 3293-3327
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000107
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 32 Region: 1-40
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000144
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 33 Region: 2781-2814
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000223
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 34 Region: 2817-2857
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000236
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 35 Region: 2697-2734
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000288
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 36 Region: 3653-3687
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000576
Family LDL receptor-like module 0.0016
Further Details:      
 
Domain Number 37 Region: 2563-2603
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000589
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 38 Region: 2488-2525
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000484
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 39 Region: 2523-2564
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000864
Family LDL receptor-like module 0.0026
Further Details:      
 
Domain Number 40 Region: 2121-2169
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000168
Family EGF-type module 0.024
Further Details:      
 
Domain Number 41 Region: 2617-2652
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000183
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 42 Region: 4370-4412
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000251
Family EGF-type module 0.033
Further Details:      
 
Domain Number 43 Region: 4272-4305
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000375
Family EGF-type module 0.038
Further Details:      
 
Domain Number 44 Region: 3700-3732
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000055
Family LDL receptor-like module 0.0033
Further Details:      
 
Domain Number 45 Region: 4199-4235
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000676
Family EGF-type module 0.014
Further Details:      
 
Weak hits

Sequence:  ENSGACP00000010002
Domain Number - Region: 4236-4272
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000194
Family EGF-type module 0.012
Further Details:      
 
Domain Number - Region: 773-818
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000255
Family EGF-type module 0.026
Further Details:      
 
Domain Number - Region: 1128-1148
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0131
Family LDL receptor-like module 0.0048
Further Details:      
 
Domain Number - Region: 4308-4341
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0287
Family EGF-type module 0.03
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGACP00000010002   Gene: ENSGACG00000007503   Transcript: ENSGACT00000010024
Sequence length 4589
Comment pep:known_by_projection group:BROADS1:groupXVI:14554631:14687685:-1 gene:ENSGACG00000007503 transcript:ENSGACT00000010024 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
LCDVGEFHCRDRETCIPEAWLCDGEPDCPDDSDETDTTCAQEVVIRCPLNHIQCVGTKKC
IHFNKLCNGARDCEDGYDEGVHCRGELLSTCHELRCRYRCVMTRNGTFCFCADGFEVGED
GTSCRDHDECAMYGACSQTCTNTYGSYGCSCTEGFILQPDRRSCKAKQDLGDSRPMLLIG
GSDRIVITHLNGTGLQPLRSLSVNGTLALDFQHHQESVCWALSTGSAGHLRCAETRNLRG
FTREREIITQQSLQHVENMAIDWLTGNFYFLDRITDKIFVCNHGGDTCVTILQLDLLNPK
GIALDPLMGMLFFTDYGNVAKVERCNMDGTNRTRLVDYNIEQPTAVALDVVKKLVYWADA
YLDYIDVVDYHGKNRHTVVHGSQVTYIYALAVFEDYLYATQSDPSKGSYPVELLRIHRFN
ITAESRTLASLGNTRGLRVYHKLTQPKVRSQACEIDSYGKPGGCSHICLLSGSYKSRTCR
CRTGYSLGSDRQSCKKPKNDLFLFYGKGRPGVIRGLDMNIKSSDEHIVPIEDLVNPRAID
YYAETGHIYFADTTSFLIGRQKIDGNSRETILKDELDNVEGISVDWIGNNLYWTNDGYRK
TISVARLERASQTRKTLLEGNMSHPRAIVVDPLNSWMYWTDWEEDEVNDSIGRIEKAWMD
GSNRRIFVTSNMLWPNGLTLDHSTGTMYWCDAYYDHIEKIQLNGTGRMVVYNGKELNHPF
GISHYRNFIFWTEYMNASVFQLDLTTGDVTLLRSERPPLFGLRVYDALSQQGDNACNVNY
GGCGTLCLAIPGGRVCACADNQLLQKNNVTCAEASSGASEPQRCKSDEFLCHNQRCIRAL
WKCDGDDDCLDGSDEESHGCYNHTCPVDQFKCSNNRCIPKRWLCDGTNDCGNNEDEANAT
CSAQPCQADQFSCQNGRCIPRAWNCDREEDCGDKSDEISCTFPTCEPLVQFSCSNGRCIS
AMWRCDSDDDCGDGSDEVGCSRSCANTQFQCTSGRCIPDHWACDGDNDCGDFSDENVTCR
GGSALLPSVIECSGEEFHCVTDGTCIPERWRCDGDKDCEDGTDEKGCEGTKRMCDPKAKF
TCKDTGKDLSTAWQSALTDLANSSSEQIKSGFLEGAKSSDGLRERMGCMSPDKICNGKVD
CADRSDEGPICDMCLAARGGCSHQCTVAPGKGVVCFCPPGLHLDSSNKTCEAVDYCSSHL
KCSQVCEQYKTTVKCSCYPGWTLDPDGDSCHSTDPFEAFIIFSIRHEIRRIDLHKRDYSL
LVPGLRNTIALDFHFNHSLLYWTDVVEDKIYRGRLAESGGVTGIEVVVQHGLATPEGLAV
DWITGKLYWIDSNLDQIEVAKLNGDMRTTLIAGGMEHPRAIALDPGQGILFWTDWDATYP
RIEAASMSGGGRHIVFKDMEIGAWPNGLTLDHLEKRIVWTDARSDAIYSALYDGSGVIEI
LRGHEYLSHPFAVSLFGGNVYWTDWRTNTLARANKWTGQNVTVIQKTSAQPFDLQIFHPS
RQPQAPNPCGDNDGRGPCSHLCLINYNRTSSCTCPHLMKLSANKQSCFGLKRFLLYVRRS
EIRGVDIDNPYMNVMTALTVPDIDDVTVVDYDAKEERIYWADIKTQTMKRAFINGTQLET
IISADVVNCRGLALDWLSRNLYWLSSENDESQINAARFDGSLKTSIIHGIDKPRCLVVHP
AKGKIYWTDGNTINMANMDGSNSKVLHQNQKDPVGLSIDYTANKLYWISSTNGTINRCNL
DGNGLEVLETLKRELAKGTALAVMGSKLWWADEESAQLGLVTKRDGQNPVILRNKTSGVV
HMKVYDREGQKGRNQCQINNGGCSQLCFPTSENTRSCSCTVGYNLRSDRMSCEGVDSFLM
YSIHEGIRGIALDPNDNTEALMPITGTLFAVGVDFHAGNDTVYWTDMGLNRISRAKRDQT
WREDIITTGISRVEGIAVDWIAGNLYWTDHGFNLIEISRLNGAYRSVVISEGLDQPRAIA
VHPQKGYLFWTEWGQNACIGRSRLDGSDQVTLVNSGIMWPNGISIDYEENTLYWCDARTD
KIERINLETGESREVVLSVANVDLFSVAVFGAYIYWSDRAYSNGSIRRAFKADTSDAVTL
RSGLGVNLKDVTIFNRGREKGTNPCARSNGGCQQLCFHLGSGRRTCSCAHGRLAEDGFAC
ERYEGYLLFSERTILKSIHLSDENDLNSPVQPFENPAFFKNVVALAFDYSQKTSRSNRIF
FSDVHFGNIQMISDDWTGRSVIAENVGSVEGLAYHQAWDTLYWTSSTTSTITRQTVDQEQ
VGALSRQAVVTLSEDDHPHALALDECQSLMFWTNWNEQRPSVMRSTLAGKNMRVIIGSDI
LTPNGLTIDHKAEKLYFSDGSLGKIERCDYDGSSRYVIVKSGPGNFYGLAIYADFIYWSD
WARRSVLRSNKYTGGDTKVLRADIPHQPMGIIAVARDTNNCELSQCRHMNGGCGDLCLLT
PDGRVNCSCRGERVLLEDNRCVSENSSCNIHTEFECGNGECVNYQLTCDGVAHCKDKSDE
KMQYCDNRSCRKGFRPCYNQRCVASSRFCDRIDDCGDNSDEAFCGNVTCASSESSCKDGS
CVPSSAWCNQVIDCADASDEKGCNHSDCSHFYKLGVTEKDFISCNSTSLCVHRTWICDGA
NDCGDYADETGCQVSHGQKCEEGHFACPSGNCISSVWLCDGQKDCEDGADEFQCDSSCLW
NQFACSKNKCIAKQWLCDGENDCEDGLDESAQICGSVTCAPGLFSCPGSYACVPKRWLCD
GERDCPDGSDELSAAGCAPNNSCDDSSFRCRNGACIPRRFACDHDDDCGDGSDESVECAY
PSCGSEEFRCGDGRCLLSSQWECDGYADCPDHSDELPLNLKCLAAGSLCNGSFFMCSNGR
CISEGSLCDGRDDCGDQSDERNCNVNECLNRRVSGCTQDCRDLPVGFKCKCWPGFHLKDD
GKTCVDVNECSTTLPCSQRCINTYGSYKCLCVDGYEALERNPDTCRALSAEEPFLIMADH
REIRKLSVDGSNYTILKQGLNNIIHIDFDYKKEFIYWVDSTRPSGRKINRMRLNGSDLKI
VHRTAVPSALAVDWIGKNLYWCDAERKTLEVSKANGLYPTALITSSLKNPTDLALDPQTG
YVFWVDCCEPPHIGRIGMDGRGQTVIIDTEIYSPTALTIDYTSKRLYWADDNHILLANMD
GTQRRKVSYDHIQGVMALTLFEDFIYWTDGKSKSLRRAHKTTGAQGMELLNSWQAIKSIK
VYHSLRQPEVPKHQCQIANGGCSHLCLLSPGGEHKCACPTNFYLAADNKTCLSNCTSSQF
RCGTDECIPFWWKCDTVDDCGDGSDEPTDCPEFKCQPGRFQCGTGLCALPPFICDGENDC
GDNSDEANCETYICLSGQFKCTRKQKCIPVILRCNGQDDCGDGEDETDCPESTCSPDQFQ
CKASMHCISKLWVCDEDPDCADGSDEANCDEKDEKTCGPHEFRCENNNCIPDHWRCDSQN
DCGDNSDEGNCKPVTCNHKDFACANGDCISSRFRCDGDYDCLDNSDEKGCEERCEEDQFQ
CHNNLCISLKWLCDGQEDCKMGEDEKNCQETAPSCSVNEYVCASGGCVSASLRCDGHDNC
LDGSDETGCVKECREDEFLCLNRAHCIPRRWRCDDVLDCMDHSDEENCSQGAFFCRADEF
ICNNTLCKLHTWVCDGKDDCGDNSDEDLDMCAKLPCPPTRPFRCRNDHVCLRTDQVCNKV
DDCGDNSDEDKCAEVAAGRPRPCGKTEFTCSNQRCIPAQLQCDLFSDCGDGGSDERDCKA
SSSGDVCEKKTNPCGEDAICNQTNANAVCQCKLGFKRNQQTGQCEEINECLQFDACPHYC
TNTKGSFKCTCDRNYKDINGNCIAKDIGPEDRVLYIANDTEIRSFVYPFNQSHGHKLLTH
IEDNARIIGMDVLFHHQNFIWATQFNPGGIFYKENLERSQTKTNVGNMCPDFRRPRDISA
DWITGNVYWTDHSRMHWFSYYTAHWTKLRYSINVGQLKGPNCTRLITDIAGEPYAIAVNP
ARGMMYWSVIGDHSHIEESAMDGSLRRVLLEKNLRRPTGLAIDYFNQRLYWADPELSQIG
SMRLDGSDPLVTISDRQGISQPYRIDIFEDYIYGTGLKHEVFKIHKYGKESVEFLHLGME
KPTNALVSHRYKQPDGSNPCLRMSCDFMCLLNPSGARCTCPEGKVLVNGTCSDAVISGEL
CRPPCENGGRCLANEKGDWRCYCWPDFSGERCEVNHCTDYCLNGGTCGGSPLGKPTCRCP
VGFSGPFCERRICDNYCLNGGTCDITQGNQPVCRCMAEYTGERCLYHICHHYCVNSKACT
LSSSGYVECVCPARFEGNKCEVDKCLRCHGAPCLINDETGDVVCNCTNGRIAPSCQLCDG
YCYNGGTCHLDPDTNLPFCQCSANWAGTQCERPAPKSSRSDNARGGSIAIIVPLVLLVIL
IVMVVAGVFICRRRQRGKRVQRQPMTNGGINVEIGNPSYNMYEVDHDNHADAGSLLRPNF
TLDPHKETSFTLIVGEQCAVLPGDTHSPLYLFPFIIFSFLRLQPINYSNPVYAKIYIDGQ
NCRKPVISIDERRELLPKKLEGTIHETAA
Download sequence
Identical sequences G3NXD3
ENSGACP00000010002 69293.ENSGACP00000010002 ENSGACP00000010002

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.