SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGACP00000017328 from Gasterosteus aculeatus 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGACP00000017328
Domain Number 1 Region: 571-832
Classification Level Classification E-value
Superfamily Trypsin-like serine proteases 1.09e-89
Family Eukaryotic proteases 0.00000231
Further Details:      
 
Domain Number 2 Region: 319-429
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 3.27e-27
Family Spermadhesin, CUB domain 0.0012
Further Details:      
 
Domain Number 3 Region: 196-308
Classification Level Classification E-value
Superfamily Spermadhesin, CUB domain 1.96e-23
Family Spermadhesin, CUB domain 0.00064
Further Details:      
 
Domain Number 4 Region: 73-164
Classification Level Classification E-value
Superfamily SEA domain 0.0000000000000222
Family SEA domain 0.01
Further Details:      
 
Domain Number 5 Region: 435-470
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000157
Family LDL receptor-like module 0.0016
Further Details:      
 
Domain Number 6 Region: 506-540
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000851
Family LDL receptor-like module 0.0024
Further Details:      
 
Domain Number 7 Region: 470-506
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000851
Family LDL receptor-like module 0.0013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGACP00000017328   Gene: ENSGACG00000013091   Transcript: ENSGACT00000017362
Sequence length 833
Comment pep:known_by_projection group:BROADS1:groupI:16837280:16849253:-1 gene:ENSGACG00000013091 transcript:ENSGACT00000017362 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MDYMDSGLRYTPKPDKDWDTNIQFLPASDNKKLEKKKGPGIVGAVIGVVIFAAVIALMTG
LLVWHFHFRNDVRLKRMYSGSMRITNQGFIDAYENSNSSEFKALARQVTSQLKSIYSKSP
QLAKYYVGSTVQAFSEGSVISYYLSEFDVPQGQEASVDSAMSSMDKLVDKEQRRVARPSN
SLVLEDVRSSECHFSMHTKPNEIGQIQSPGFPNSAYPPNTFIQWQLRADPKHIIKLDFDT
MNLEEDCSNDFIKIYDSLVAIESSVMDEMCGYHSPSQPLTFLSSGNVMLVTMASDKENDY
PGFRAKVSQVPRGSKAVTCGGNLMGEKGTFTSPNFPSYYPPRNLCQWSIQVPNGNAVKLT
FKTFLLSEPGQKDGEDCLKDYVQVNGKKFCGEKPEGTVTETSQTNTMEVVFFSDASYVDR
GFNASYEAINAKDPCPKQFQCRNQRCIKTELQCDGWNDCGDMSDELDCKCKPQDISCKNG
LCKPMFWKCDGVDDCGDQTDELNCGCKSGLVTCKNNECVSEKHLCDGIDNCGDGSDELNC
GRSTGVLCSDLTYKCKNNKCIDTVNPECDGTPDCEDGSDEENCDCGRSLFKTSRIVGGEN
TQDGEFPWQVSLHVKGAGHVCGASIISPQWLVTAAHCVQDDPRTRYSQPGTWEAYLGLHI
QGNTAKNVVKRNLKQVIAHPNYNAYTYDNDIALMELDSPVTYSDYIRPICLPSPQHDFPA
GSTVWITGWGATREGGFAAKVLQKAEVRIINYSVCNDLMKAQLTSRMLCAGVLTGGVDAC
QGDSGGPLSSPSGSRMFLAGVVSWGDGCARRNKPGIYTTVTKFRGWVKEKTGV
Download sequence
Identical sequences G3PIA1
69293.ENSGACP00000017328 ENSGACP00000017328 ENSGACP00000017328

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]