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Domain assignment for ENSGACP00000017408 from Gasterosteus aculeatus 76_1

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSGACP00000017408
Domain Number 1 Region: 88-221
Classification Level Classification E-value
Superfamily Cadherin-like 5.5e-24
Family Cadherin 0.00077
Further Details:      
 
Domain Number 2 Region: 311-429
Classification Level Classification E-value
Superfamily Cadherin-like 4.45e-21
Family Cadherin 0.0015
Further Details:      
 
Domain Number 3 Region: 200-296
Classification Level Classification E-value
Superfamily Cadherin-like 4.85e-17
Family Cadherin 0.00072
Further Details:      
 
Domain Number 4 Region: 420-522
Classification Level Classification E-value
Superfamily Cadherin-like 0.0000000000012
Family Cadherin 0.0055
Further Details:      
 
Domain Number 5 Region: 25-100
Classification Level Classification E-value
Superfamily Cadherin-like 0.00000000157
Family Cadherin 0.0026
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGACP00000017408   Gene: ENSGACG00000013163   Transcript: ENSGACT00000017442
Sequence length 755
Comment pep:known_by_projection group:BROADS1:groupIII:703525:708437:1 gene:ENSGACG00000013163 transcript:ENSGACT00000017442 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
CLLDSVFSGCSFHLQIVSDAEAQFRLYYTIGGPGVDQPPVGVFSLNRTGTLFVHKQVDRE
EFPRFTLTVRAFDKITNEERDEPLDIRIDVDDVNDNAPTFTGPQQYTVLEQSVVGTVVGK
VNATDKDQAGTLHVKIRYSLKTGLDLFAIDPGTGVITTATNTLDREVKDKHLVVVEIRDM
DGAVSGLFNTATATIAVGDINDNPPTFPQTSYTASIAENEMEKLILRIPIDDKDLITTPN
WISKFVITKGNENGNFRIDTDPKTNEGLLYVSKPLDFEQTSNVNLEIMARNEAELVGTTA
QWMSVPVNVVVNNVDEGPQFSAPTIRLNVKENTANGTLIGTYTALDPETKSSAGIMYFKA
TDPASWINVDRNNGELRVANTIDRESDFVQNGIYNITVRAVDASAKTGTGTVIIVVEDVN
DNLPTLPARDLVMCEKEGELGSMLVTAEDLDRAPFSSPFSFSLPSDHDGKWSITKYNDTS
ATLKQMKELPTGRHTVPVDIKDLQGAGKTQTATVRICSCRNNQCIVNPNSVSFGPMGLLA
LLLPLFLLLLLGLLLGFFCMTKTEKKEIDDIGDNGGILLKSNTESPGEEVDHSLIAGPYI
VTDSVVKGSVKGVNSAWLASNGSGTLGAKTTNPIYNFDVVTSDLGQFSSGRYNQFEENYM
GNSEGFDNRYLTQDSTYLHNWQTNGLYLNKKLTFLGGEDDGRYAEDVVLRHAYEGVGSAA
GSVGCCSDFGDDDNLDFLNGLGPKFKALGELSRKK
Download sequence
Identical sequences G3PII0
ENSGACP00000017408 69293.ENSGACP00000017408 ENSGACP00000017408

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