SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGACP00000018269 from Gasterosteus aculeatus 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGACP00000018269
Domain Number 1 Region: 396-518
Classification Level Classification E-value
Superfamily Mannose 6-phosphate receptor domain 3.53e-18
Family Mannose 6-phosphate receptor domain 0.008
Further Details:      
 
Domain Number 2 Region: 214-268
Classification Level Classification E-value
Superfamily EF-hand 0.0000902
Family Calmodulin-like 0.057
Further Details:      
 
Weak hits

Sequence:  ENSGACP00000018269
Domain Number - Region: 40-70
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000275
Family LDL receptor-like module 0.0051
Further Details:      
 
Domain Number - Region: 72-111
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00182
Family LDL receptor-like module 0.0055
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGACP00000018269   Gene: ENSGACG00000013828   Transcript: ENSGACT00000018304
Sequence length 534
Comment pep:known_by_projection group:BROADS1:groupXI:13569552:13573421:1 gene:ENSGACG00000013828 transcript:ENSGACT00000018304 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MTCQHLLLFLLLAVGVSAVEVQRPRGVPLSKRQFYEEGKPFTCLDGSRTIPFDRVNDDYC
DCQDGSDEPGTAACPNGSFHCTNAGFKPGFIPSSRINDGICDCCDTTDEYNSGATCQNTC
RELGRKERESMQKMAEVAKEGFLLKQQLIQESKRGLEEKKAKHADIDLGKKELENKVEAL
RTVKEAAEEPEKEAKERHLKAWEEQKAVIQMEKDKAKMAEVFLELDDDADGFVSVAELLS
HSELDSDLGDSFTEAEAQALLGGADQVDHAAFESVWSNIKGKYVSEHQANADPPAPVETP
LEEIRETDSDHESEQYPEEDIPDEEEEEDDEEEEEDDDTDDREVPPTAQSQEKKDGDDEG
TMPPYDPDTQSLIDAAQKARDAFDEAEKALREVDDQIKNLEKEISFDFGPSAEFAYLYSQ
CYELTTSEYIYRLCPFNRVSQKPKFGGSETNLGSWGQWAGPEDNIYSVMKYDHGTGCWQG
PNRSTTIKLTCGKETVLTSTSEPSRCEYLMEFITPAVCQEPRSLDSDHHEHVEL
Download sequence
Identical sequences G3PKY9
ENSGACP00000018269 ENSGACP00000018269 69293.ENSGACP00000018269

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]