SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGACP00000021088 from Gasterosteus aculeatus 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGACP00000021088
Domain Number 1 Region: 423-529,651-699
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like II 2.17e-32
Family Phosphate binding protein-like 0.00000489
Further Details:      
 
Domain Number 2 Region: 66-346
Classification Level Classification E-value
Superfamily Periplasmic binding protein-like I 5.36e-26
Family L-arabinose binding protein-like 0.0092
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGACP00000021088   Gene: ENSGACG00000015979   Transcript: ENSGACT00000021128
Sequence length 1485
Comment pep:known_by_projection group:BROADS1:groupIX:656055:705848:-1 gene:ENSGACG00000015979 transcript:ENSGACT00000021128 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
SLSIAVILVGNSSDVTLGAGLEKEDFLHIPYPPKVELVTMNETDPKSIINRICAQMTRSS
LQGVVFGDDTDQEAIAQILDFISAQTHIPILGIRGGSSMVMAAKDDHSMFFQFGPSIEQQ
ASVMLNIMEEYDWYIFSIVTTYYPGYQDFVNKVRSTIDNSFVGWELEEVFLLDMSVDDGD
SKIQNQLKKLQSPVILLYCTKEEASTIFEVAHSVGLTGYGFTWIVPSLVAGDADHVPDVF
PTGLISVSYDEWDYNIEARVRDAVAVIATATSTMMLDRGPHTLLKSSCFGTPDKKSSNTV
HSRYLMNVTFEGRNLSFSEEGHQMFPKLVIILLDKDRQWDRVGKWERGSLTMRYHVWPRF
ELYSAAEEREDHLSIVTLEEAPFVIVEDVDPLSGTCMRNTVPCRKQLKLSNQTGDSGIYI
KRCCKGFCIDILKKIAKAVKFTYDLYLVTNGKHGKKVNGTWNGLVGEVVLKNAHMAVGSL
TINEERSEVIDFSVPFIETGISVMVSRSNGTVSPSAFLALEPFSADVWVMMFVMLLLVSA
VSVFVFEYFSPVGYNRCLADGREPGGPSFTIGKAVWLLWGLVFNNSVPVQNPKGTTSKIM
VSVWAFFAVIFLASYTANLAAFMIQEEYVDQVSGLSDKKFQNPNEFSPPFRFGTVPNGST
ERNIRNNYRDMHSYMTSFHQKNVDEALYSLKSGFLCIFIYIGIVAADVDCCFNVVMHKQS
LETTCHIITSHVDNAWTCDSTCVRLLPPGDMEEFEALWLTGICHNEKNEVMSSQLDVDNM
AGVFYMLGAAMILSLITFICEHWFYWQLRFCFMGTCTGQPGATFSISRGIWSCIHGIQIE
ENKSTADSPSATMKKNMNNTHSNILRLLRTAKDMTAVPGINGSPHAALEYGHSGRDSAIY
DIQEHRRSLVGHPVDCKAAPPYLPEDNMFSDYISEVERTFGNLPLKDSNLYQDHYLHHHP
ASALGMSGPAPNRPRSLGSTSSLEGGMFDCDSLGGGVAPIFTTQPRPSMTHRNTKQFDLI
TGHAPADSGQGGFKGSNVYGRFSFKGGGSGGEDGNIRSDVSDISTHTVTYGNLEGNNKRR
KQYRDSLKKRPASAKCRREQDEIELSGLRRRAHHHTVHHHFPKDKENLRDFYADQFRAKE
GKSKWEQEGGGSGVGGGSGGGICKSKGKKPEGKGGLGSVSAGQQAHTCWEQGVSGLGGGG
IAGGDWECRNSHNACHRPSSASCKRCDSGKIPPSNLYNISEDNMAFAGVKSSVATGQAQA
QRRKLGAGGRVLRRQHSYDTFVDLQREGAGRVPRSVSLKDRERSMEGPSPYAHMFERYAG
ERESSMFGGVGGDRAKSSRGAGTYSLSKSLYPDKVNQNPFIPTFGDDQCLLHGAQPYYVK
KPQTPQQQQQLLNNSRGGGDFRGSMGTASYLPASATAGVMSNVAPRFPNDLCLGGVGGPM
GNHHGASKLLPLGRDTLGLGPGQRTFNGASNGHVYEKLSSIESDV
Download sequence
Identical sequences G3PU01
ENSGACP00000021088 ENSGACP00000021088 69293.ENSGACP00000021088

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]