SUPERFAMILY 1.75 HMM library and genome assignments server

Superfamily is undergoing a server migration - you are now browsing on the new server. Please contact us if you experience any problems.

Domain assignment for ENSGACP00000006521 from Gasterosteus aculeatus 76_1

Domain architecture

Domain assignment details

show help)
Strong hits

Sequence:  ENSGACP00000006521
Domain Number 1 Region: 25-136
Classification Level Classification E-value
Superfamily TPR-like 1.9e-30
Family Tetratricopeptide repeat (TPR) 0.0013
Further Details:      
Domain Number 2 Region: 183-257
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 3.09e-18
Family Canonical RBD 0.0053
Further Details:      
Weak hits

Sequence:  ENSGACP00000006521
Domain Number - Region: 131-171
Classification Level Classification E-value
Superfamily UBA-like 0.000281
Family UBA domain 0.035
Further Details:      

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGACP00000006521   Gene: ENSGACG00000004936   Transcript: ENSGACT00000006538
Sequence length 318
Comment pep:known_by_projection group:BROADS1:groupXV:1353983:1357697:-1 gene:ENSGACG00000004936 transcript:ENSGACT00000006538 gene_biotype:protein_coding transcript_biotype:protein_coding
Download sequence
Identical sequences G3NMF8
ENSGACP00000006521 ENSGACP00000006521 69293.ENSGACP00000006521

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]