SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGACP00000011957 from Gasterosteus aculeatus 76_1

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGACP00000011957
Domain Number 1 Region: 343-472
Classification Level Classification E-value
Superfamily C-type lectin-like 5.31e-38
Family C-type lectin domain 0.00015
Further Details:      
 
Domain Number 2 Region: 147-324
Classification Level Classification E-value
Superfamily C-type lectin-like 1.75e-36
Family C-type lectin domain 0.00038
Further Details:      
 
Domain Number 3 Region: 783-910
Classification Level Classification E-value
Superfamily C-type lectin-like 2.98e-34
Family C-type lectin domain 0.00066
Further Details:      
 
Domain Number 4 Region: 484-622
Classification Level Classification E-value
Superfamily C-type lectin-like 1.86e-33
Family C-type lectin domain 0.00072
Further Details:      
 
Domain Number 5 Region: 924-1067
Classification Level Classification E-value
Superfamily C-type lectin-like 9.27e-32
Family C-type lectin domain 0.001
Further Details:      
 
Domain Number 6 Region: 620-771
Classification Level Classification E-value
Superfamily C-type lectin-like 3.67e-30
Family C-type lectin domain 0.00049
Further Details:      
 
Domain Number 7 Region: 1092-1217
Classification Level Classification E-value
Superfamily C-type lectin-like 3.95e-26
Family C-type lectin domain 0.0012
Further Details:      
 
Domain Number 8 Region: 1223-1352
Classification Level Classification E-value
Superfamily C-type lectin-like 1.7e-23
Family C-type lectin domain 0.0019
Further Details:      
 
Domain Number 9 Region: 2-133
Classification Level Classification E-value
Superfamily Ricin B-like lectins 1.64e-18
Family Cysteine rich domain 0.023
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGACP00000011957   Gene: ENSGACG00000009057   Transcript: ENSGACT00000011981
Sequence length 1441
Comment pep:known_by_projection group:BROADS1:groupXI:6248585:6263470:1 gene:ENSGACG00000009057 transcript:ENSGACT00000011981 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
LDSDEFAFFNGGPKACLGVRDHSLTLSTSCEEANQRWKWVTRGRLFNLGSSLCLGVTTGN
VTSRLDKSPLGVYTCDREPPRVHWTWNCDQVLDNLNNYIPIPTFWNMSLSSSAPNLKWTL
HGGGQDLCSKTYREIYTIQGNSHGRPCYLPFLYDGQWFHNCTGIGREDGHLWCATTHDYG
KDERWGFCPVKSTGCETFWDTDPLTDSCYQFNFQATLSWSEARISCQQQGADLLSITKLH
EQTYINGFLTGYSAALWIGLNDLDINGGWQWADSSPLKYLNWESEQPNHAEEENCAVIRT
ESSGRWQNRDCSEALPYVCKKRPNATLDPFTTAPTDSWADDEKYECDVGWQAFQAGCYKL
TSEKIDWDSAQKTCQRMEANLLSIHTLPELEFTIRNLMKDIDQLWIGLHDTDMQMDFQWT
DHTPVIFTYWHPFEPNNFRNTQEDCVSIWGAEGRWDDSPCNLTLPSICKKPGTKSEGSPQ
HQDCKQGWKWHSPACYWVGEDLFTFDEARKSCEEHGAALVTITNRFEQAFANSLVFGRSG
DSFWIGLHDQGSRGSFHWLSGDEVSYTNWNRDQPVSVRGGCVSMATGFATGLWEVKACVS
SKAKFLCRQNQDASLSPEPPVPQPTPSLSGSCPSGWKSNSNLHHCYKVFHSFQLEKKLDW
LQAHLSCRGHGANLLSISSAEEEHFVVQILHEAFGESEDHEQQWFWIGLNRRNPMDNGSW
KWSDGLVFTYQNFGRSDYNFRQCAAVDLGTMTWLAMQCDVELDWICKIPKGSVDKQPEIS
EGTSPEWIPFQEAEYKFFDQRTTWDQAQRICSWIDSSLASVHSTEEEAFLANTLNKMVKA
KGDSWWLGLHTYENDGRFRWSDHSVLNYVFWALGRPHPVSRDRRCVKLSSSEAEWADEKC
HSDLPYICKRVNVTGTIPPTPSPPHSPSGCPDGWSSHRHKCFRVFDQSHRVTWSAAKLKC
DTQGGVLAVVSNHLEQAFVTTLLQNASVDLWVALTSDCKGHFQWAKASLLSYTNWAPGQP
VDNSGPHHDKGPGNCVVMIHGTPQKNTGMWASRACEMESNGFICQRAQESGLPAAPALIP
ASLSKPVELGGVTYRVVEKRLDWTGALHLCESLNGTLATAKDPYQQAYLTLLINSLRRPA
WIGIYNYGGRSVVWLGDEEVSYSNWNDGEPHLRAGCGHMTTTGQWTLTPCDAKLEAAICQ
ISPDEPVRHDWMYPGQCPHSLGEWSWVSFRNHCYAFNLQSLRLQQDARASCEKVGAELLS
ILDETENGFVWEHIQSYAEQAHGAWLGISVKGTGRGLVWSEDTQMSYTNWETHDVAFSVL
SPNSCFWIQSNSGLWKPGSCRNRTHGVICKLPRIRRNGLLCLPSIQTLVKDNHLPTLIVV
MVTGLVLVALIVGGIYLYRRRTVGSQGSYEGARYSRTNSSLADQAEKNILVSDMELNEQA
E
Download sequence
Identical sequences G3P2Y4
69293.ENSGACP00000011957 ENSGACP00000011957 ENSGACP00000011957

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]