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  Home > Genomes > Gasterosteus aculeatus 76_1 > ENSGACP00000012292

Domain assignment for ENSGACP00000012292 from Gasterosteus aculeatus 76_1

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSGACP00000012292
Domain Number 1 Region: 2987-3245
Classification Level Classification E-value
Superfamily YWTD domain 9.16e-54
Family YWTD domain 0.00000209
Further Details:      
 
Domain Number 2 Region: 1229-1494
Classification Level Classification E-value
Superfamily YWTD domain 4.19e-53
Family YWTD domain 0.00000203
Further Details:      
 
Domain Number 3 Region: 3835-4107
Classification Level Classification E-value
Superfamily YWTD domain 1.16e-45
Family YWTD domain 0.00000716
Further Details:      
 
Domain Number 4 Region: 1850-2106
Classification Level Classification E-value
Superfamily YWTD domain 8.24e-45
Family YWTD domain 0.0000143
Further Details:      
 
Domain Number 5 Region: 1544-1801
Classification Level Classification E-value
Superfamily YWTD domain 2.09e-42
Family YWTD domain 0.0000301
Further Details:      
 
Domain Number 6 Region: 516-777
Classification Level Classification E-value
Superfamily YWTD domain 1.03e-41
Family YWTD domain 0.00000862
Further Details:      
 
Domain Number 7 Region: 183-453
Classification Level Classification E-value
Superfamily YWTD domain 7.85e-40
Family YWTD domain 0.000093
Further Details:      
 
Domain Number 8 Region: 2157-2427
Classification Level Classification E-value
Superfamily YWTD domain 2.22e-35
Family YWTD domain 0.0000258
Further Details:      
 
Domain Number 9 Region: 2893-2979,3238-3299
Classification Level Classification E-value
Superfamily Growth factor receptor domain 8.63e-24
Family Growth factor receptor domain 0.018
Further Details:      
 
Domain Number 10 Region: 99-172,456-504
Classification Level Classification E-value
Superfamily Growth factor receptor domain 6.75e-18
Family Growth factor receptor domain 0.011
Further Details:      
 
Domain Number 11 Region: 1133-1221,1487-1539
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.0000000000000942
Family Growth factor receptor domain 0.019
Further Details:      
 
Domain Number 12 Region: 827-868
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000000602
Family LDL receptor-like module 0.00013
Further Details:      
 
Domain Number 13 Region: 3327-3367
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000301
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 14 Region: 2645-2682
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000314
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 15 Region: 3528-3567
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000314
Family LDL receptor-like module 0.00057
Further Details:      
 
Domain Number 16 Region: 868-910
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000353
Family LDL receptor-like module 0.00072
Further Details:      
 
Domain Number 17 Region: 3612-3656
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000471
Family LDL receptor-like module 0.00099
Further Details:      
 
Domain Number 18 Region: 2685-2725
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000497
Family LDL receptor-like module 0.00072
Further Details:      
 
Domain Number 19 Region: 3489-3529
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000537
Family LDL receptor-like module 0.00083
Further Details:      
 
Domain Number 20 Region: 953-991
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000615
Family LDL receptor-like module 0.00096
Further Details:      
 
Domain Number 21 Region: 1041-1086
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000916
Family LDL receptor-like module 0.00021
Further Details:      
 
Domain Number 22 Region: 3570-3605
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000000969
Family LDL receptor-like module 0.00046
Further Details:      
 
Domain Number 23 Region: 2515-2556
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000011
Family LDL receptor-like module 0.0017
Further Details:      
 
Domain Number 24 Region: 6-44
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000017
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 25 Region: 3445-3485
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000017
Family LDL receptor-like module 0.00077
Further Details:      
 
Domain Number 26 Region: 993-1031
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000183
Family LDL receptor-like module 0.00011
Further Details:      
 
Domain Number 27 Region: 908-948
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000249
Family LDL receptor-like module 0.001
Further Details:      
 
Domain Number 28 Region: 2862-2903
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000275
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 29 Region: 2774-2810
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000327
Family LDL receptor-like module 0.0011
Further Details:      
 
Domain Number 30 Region: 2731-2765
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000034
Family LDL receptor-like module 0.00085
Further Details:      
 
Domain Number 31 Region: 3409-3444
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000055
Family LDL receptor-like module 0.00091
Further Details:      
 
Domain Number 32 Region: 2555-2595
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000681
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 33 Region: 2812-2851
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000000995
Family LDL receptor-like module 0.00063
Further Details:      
 
Domain Number 34 Region: 3288-3323
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000131
Family LDL receptor-like module 0.0012
Further Details:      
 
Domain Number 35 Region: 3698-3738
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000314
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 36 Region: 3369-3407
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.0000000628
Family LDL receptor-like module 0.0015
Further Details:      
 
Domain Number 37 Region: 3657-3691
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000301
Family LDL receptor-like module 0.0025
Further Details:      
 
Domain Number 38 Region: 1804-1853
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000427
Family EGF-type module 0.016
Further Details:      
 
Domain Number 39 Region: 2480-2517
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.000000615
Family LDL receptor-like module 0.0014
Further Details:      
 
Domain Number 40 Region: 1104-1142
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000072
Family LDL receptor-like module 0.0024
Further Details:      
 
Domain Number 41 Region: 53-88
Classification Level Classification E-value
Superfamily LDL receptor-like module 0.00000419
Family LDL receptor-like module 0.0032
Further Details:      
 
Domain Number 42 Region: 3787-3823
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000051
Family EGF-type module 0.0087
Further Details:      
 
Domain Number 43 Region: 4330-4371
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000586
Family Integrin beta EGF-like domains 0.083
Further Details:      
 
Domain Number 44 Region: 786-830
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000798
Family EGF-type module 0.029
Further Details:      
 
Weak hits

Sequence:  ENSGACP00000012292
Domain Number - Region: 4161-4197
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000149
Family EGF-type module 0.025
Further Details:      
 
Domain Number - Region: 4197-4230
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000152
Family EGF-type module 0.021
Further Details:      
 
Domain Number - Region: 2113-2161
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000447
Family EGF-type module 0.022
Further Details:      
 
Domain Number - Region: 4233-4268
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00089
Family EGF-type module 0.024
Further Details:      
 
Domain Number - Region: 4269-4309
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00161
Family EGF-type module 0.012
Further Details:      
 
Domain Number - Region: 2435-2495
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0195
Family EGF-type module 0.029
Further Details:      
 
Domain Number - Region: 3743-3794
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0838
Family EGF-type module 0.06
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGACP00000012292   Gene: ENSGACG00000009275   Transcript: ENSGACT00000012316
Sequence length 4508
Comment pep:known_by_projection group:BROADS1:groupXII:11375385:11430574:-1 gene:ENSGACG00000009275 transcript:ENSGACT00000012316 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
KADELPKTCSPKQFVCKDQVTCISKGWRCDGEKDCPDGSDESPDICSNNRVNQCPVNEHG
CLDLDVCIHMSKVCDGVPDCSDGWDEGPHCRAAEGAPSCASHGCEFHCAVTHDGPLCYCS
NGYELAADKKTCKDFNECNVYGTCSQTCTNTDGSNTCSCVEGYLLQPDNRSCKAKNKPVD
RLPMLLIANLHDIRCTSLSGSSSRLPSIATKQTMAMDFIYAEETVCWIDVGDTPAATQLK
CASIPDLKTVTNIRTINVSLSLHHVEQMAIDWLTGNFYFLDDVDDRVFVCNKNGQTCVTL
LDQELYNPKGIALDPAMGKVFFTDYGSTPRVERCDMDGQNRTKLVDSKIVFPHGITLDLV
NRLVYWADAYLDYIEVVDYEGKNRHTIIQGLLIEHLYGLTVFENYLYATNSDEGNLNPKT
SVIRVNRFNSSDFQVVTRVDRGAALHVYHQRRQPQVRSHACAVDQLGKAGSCSDICLLSN
SHKTRTCRCRSGFSLGSDGKSCKKPDHELFLVYGKGRPGIIRGMDMNAKVPDEYMIPIEN
LMNPRALDFHAASEFIYFADATNYIIGRQKIDGTERDTILKEGIHTVEGIAVDWMGGNLY
WTDDGPKKTISVARLEKASQTRKTLIEGKMSHPRAIVVDPQNGWMYWTDWEEDPTESNRG
KIKKAWMDGSHHQVFLTSKTVLWPNGLSLDIPQGILYWVDAYYDRIELVYLNTTERKVVY
EGQELNHAFGLCHYKEFLFWNEYRGGSIYKLDQATKIVTLLRNERPPIFEIRVYDAHQQQ
VGSNVCRVNNGGCSSLCLAIPDGRSCGCANDQILDVDNVTCKANPSYVPPPQCQPGEFAC
KNNRCIQERWKCDGDNDCLDNSDEAPELCHQHTCPADRFKCQNNRCIPLRWLCDGDNDCG
NDEDESNTTCSARTCPPNQYPCASRRCIPISWTCDLDDDCGDRSDEPDSCAYPTCFPLTQ
FTCANGRCININWRCDNDNDCGDNSDEAGCSHSCSNVQFKCNSGRCIPEYWTCDGDNDCG
DYSDETHANCTNQATRPPGGCHVDEFQCRLDGLCIPMRWRCDGDTDCMDLSDENNCEGVT
HMCDPGVKFSCKDSARCISNCEALVCKLSHHMCPTNDSICLPEGKLCDGTDDCPDGSDEK
LCDLCSLDNGGCSHNCSIIPGEGFMCSCPLGLELGADNKTCQIQSFCAKHLKCSQKCEQE
KSSVKCSCYEGWELEPDMESCKSTDPFKPFIIFSNRHEIRRIDLHKGEFSVLVPGLRNTI
ALDFHLAQSTLYWTDVVEDKIYRGKVSDNGALTSFEVVIQYGLATPEGLAVDWIAGNIYW
VESNLDQIEVAKLDGTMRTTLLAGEVEHPRAIALDPRDGILFWTDWDASLPRIEAASMSG
EGRRTIHRETGSGGWPNGLTVDYMERRIVWIDARSDAIYSAMYDGSGLIEVLRGHEYLSH
PFAVTMYGGEVYWTDWRTNTLAKANKWTGHNVTVVQRTNTQPFDLQVYHPSRQPQAPNPC
ATSDGKGPCSHLCLINFNQTFSCACPHLMKLQPDKRTCKESRKFLLYARQIEIRGVDIDN
PYYNYIISFTVPDIDNVTVVDFDAVEHRIYWSDVRTQTIKRAFINGTGVETVVAADLPNA
HGLAVDWVSRNLFWTSYDANKKQINVARLDGSFKNAVIQGLDKPHSLVVHPLLGKLYWTD
GDNISMANMDGSNSTVLFTDQKGPVGLSIDYENKQLYWISSGNSTISRCHLDGTNLEILE
GVRGKLIKATALAIMGDKVWWADQGTDQIGTCDKADGGNWKVLRNNTSPMMHMRIYDEDV
QNAGINLCSNNNGDCSQLCLPTSPTTRACMCTAGYSLKTGQQSCEGMGSFLLYSVHEGIR
GIPLDPADKSDALVPVSGTSLAVGIDFHAENDTIYWVDMGLSTISRAKRDQTWREDVVTN
GIGRVEGITVDWIAGNIYWTDQGFDVIEVARLNGSFRYVVISQGLDKPRAITVHPVKGYL
FWTEWGQYPRIERSRLDGSQRMVLVNVSISWPNGISVDYEGGMLYWCDARTDKIERINLE
TGENRELVLANNNMDMFAVSVFEEFIYWSDRTHANGSIKRGNKDNATDAVQLRTGIGVQL
KDIKVFNRARQQGTNVCKDNGGCEQLCLFRGNGQRTCACAHGMLAEDNRGCRDYDGYLLY
SERTILKSIHLSDETNLNAPIKPFEDPDHMKNVIALSYDYHGGGGKGANRIFFSDIHFGN
IQQINDDGTDRKIVVDNVGSVEGLAYHRGWDTLYWTSYTTSTITRHTVDQSRSVAYNRNT
VVTMSGEDHPRAFVLDECQDIMFWTNWNEQAPSIMRASLNGANVLAIIGSNIKTPNGLAI
DHRAEKLYFSDATLDKIERCEYDGSSRYVLLKNEPVHPFGLAVYGDYIFWTDWVRRAVLR
ADKYTGSDMKVLRADIPQQPMGIVAVANDTNSCEFSPCRSNNGGCQDLCLPTSDGRVNCS
CRGDRQLLEDNTCSSLNVSCGSVDDFECGNGDCINYSLTCDGMAHCKDKSDEKQSYCANR
ICKKGYRRCMNGRCIGHQFWCDGTDDCGDHSDELPCNMTLCKVGEFQCKDGSCISNFSRC
DQVVNCEDASDEINCQPTDCSRFFRLGVKGVSFQSCEKTTLCYRPGWVLCLLSKCFLGLY
NYKRKLKCPVNFFACPSGRCIPMSWTCDKENDCENGADETHCDYFSFADKFCTSTQFECG
NHRCISSHWVCDGSDDCGDGSDEDQKCKSKTCSPEAFQCPGSHMCVPQRWKCDGDKDCPD
GADESVKAGCMYTNNTCDENEFVCQNRQCIPKHFVCDHDIDCSDGSDESPECEYPACGPD
EFRCANGRCLNQKKWECDGELDCQDGSDEAPKNPRCTDSERACNESAFMCRNGKCLNETS
LCDRNDDCGDGSDELNCFINECLNSKLSGCSQLCDDLKIGFKCRCHPGFHLKRDGKTCVD
IDECTTTYPCSQRCINTHGSFHCLCVDGFELSPNDPTVCKSTSEEEPYLIFANRYYLRKL
NLDGSNYTLIKQGLNNAVALDFHYAEQMIYWTDVTTQGSMIRRMLMNGSNIEVLHRTSLS
NPDGLAVDWVGLNLYWCDKGRDTIEVSKLNGAYRTVLVNNGLREPRAVAVDVRYGYLYWS
DWGDNPHIGRIGMDGTNRSVIVEDKITWPNGLTLDFINDRIYWADAREDYIEFASLDGTN
RHTVLSQDIPHIFAMTLFEEHIYWTDWETKSINRAHKSLGTNKTTLISTLHRPMDIHIYH
PYRQPEVLNHPCQTNNGGCSNLCLLSPGGGYKCACPTNFYLANDQRTCMSNCTASQFVCK
NDKCIPFWWKCDTEDDCGDRSDEPAECPEFKCRPGQFQCGTGICTNPAYICDGDNDCQDN
SDEANCDIHVCLPSQFKCSHPSRCIPGIFRCNGQDNCGEGEDEKDCPEVTCAPTQFQCAI
TKRCIPRVWVCDRDNDCVDGSDEPANCTQMTCGVDEFRCKDSGRCIPARWKCDGEDDCGD
ASDEPKEECAERTCEPYQFRCRNNRCVPGRWQCDYDNDCGDNSDEDKCMPRQCSESEFAC
TNGRCIAGRWKCDGDHDCADGSDENGCDLKCDNDQFQCKNGHCIPIRWRCDADPDCMDSS
DEEHCGSAAGRHCPLDEFQCNNTLCKPLAWKCDGEDDCGDNSDENPEECRKFQCPPTRAF
RCRNDRVCLQMSKRCDKVNNCGDNSDELNCVTSSETLPAVPTCEKDEFLCANGRCVSSTL
RCNLFNDCEDYGSDEINCKTDTKLNDCRSNRTQCGDGDEAHCVINGTDSFCSCKPGFRKT
GHHTCGDKNECLQFGVCSHVCNNTKGSYKCSCHKYFTRISDTCKADSMNSSRQILYIADD
NEIRSLDPGMRNWRYEQTFQGDASVRIDAMDLHVKTNRIFWTNWHTGRISSYELPGPSTS
SSSSPSERRITNLQIKELKMPRGIAVDWVAGNLYWTDSGRDVIEVAQMSGQHCKTLVSGM
IDEPYAIVVDPQRGTMYWADWGNHPKIETAAMDGTLRQTLVHENIQWPTGLAVDYFNERL
YWADAKLSVIGSVRLDGSDPLISVSGIKNNLLHPYSIDIFEDYIYGVTYVNNVVFRVNKF
GKGPMENLTTGINHATDIVLYHRYKQPEITNPCDRKKCEWLCLLSPSGPVCTCPNSYVAD
NGTCVERPSPTQSPFSPPTGPCDIPCQNGGSCFLNARLVAKCRCQPSYTGERCEINQCRD
YCKNGGTCAASHTGAPTCRCPKGFTGPNCNRPTCQDYCLNEGNCSVNTGNQPTCSCLPEY
KGDTCEYTKCEGFCYNGGTCLQTANGTKICQCLSQYIGNQCELDKCEFCGTGKCLTSSSG
EVSCSCPNGQIQPSCYSCLDYCSNGQCSVATRTLLPQCKCPVGWRGYRCNVAAAPRDSPS
SSGSTASVIIPVLLLLLLALLVVGAILWYKRRMRGAKGFQHHRMTNGAMNVEIGNPAYKI
YEGDPDDDAGELLDSDYALDPDKPTNFTNPVYATLYMGAHNSRNSLASTDEKKELLSQGD
EDMSDPLA
Download sequence
Identical sequences G3P3W9
ENSGACP00000012292 69293.ENSGACP00000012292 ENSGACP00000012292

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.