SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGALP00000002049 from Gallus gallus 76_4

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGALP00000002049
Domain Number 1 Region: 324-389
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000000335
Family Laminin-type module 0.024
Further Details:      
 
Domain Number 2 Region: 387-436
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000053
Family Laminin-type module 0.01
Further Details:      
 
Domain Number 3 Region: 439-486
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000145
Family Laminin-type module 0.0029
Further Details:      
 
Domain Number 4 Region: 257-326
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000251
Family Laminin-type module 0.063
Further Details:      
 
Domain Number 5 Region: 489-526
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000614
Family Laminin-type module 0.018
Further Details:      
 
Domain Number 6 Region: 542-589
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000419
Family Laminin-type module 0.029
Further Details:      
 
Weak hits

Sequence:  ENSGALP00000002049
Domain Number - Region: 963-1158
Classification Level Classification E-value
Superfamily Tropomyosin 0.000118
Family Tropomyosin 0.0066
Further Details:      
 
Domain Number - Region: 98-155
Classification Level Classification E-value
Superfamily Galactose-binding domain-like 0.000989
Family Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) 0.051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGALP00000002049   Gene: ENSGALG00000001343   Transcript: ENSGALT00000002051
Sequence length 1175
Comment pep:known_by_projection chromosome:Galgal4:26:3056480:3075970:-1 gene:ENSGALG00000001343 transcript:ENSGALT00000002051 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MESCCQLWLWALFVLLACPQPGVAQSACSHGACYPPGGDLLLGRGQHLTASSTCGLTKPE
TYCTPHGEWNMRCCKCDSRLPHARNGHRVANMLSSAGRARWWQSQSGMEHVYLQLDLDEK
FQLSSIVLDFRSPLPAAMLIERSTDFGKTWEVYQYLASDCAAAFPHIPRGAPESWGDARC
QPLQAQHGYPMHGSKVKFSVQDLASTITTSYSQSVNKLGQFTNLRINFTQLPHIMHHNYR
SPSSFYAVTEMQVLGSCFCNGHADRCIPSRDPHAMDNCSLPQVHGRCECQHNTAGPNCGH
CAALYNDRPWAPAEDNDPHECQLCNCNGHSASCHFDPEVFHSSGGVSGGVCDDCQHNTEG
NNCERCKTNYFRNQRQDLTHPEACQPCECDPDGTVPGSVCDPLSGHCVCKENVQGERCHL
CKPGFAQLAHANPLGCRRCACNVLGTRQNVPCDDETGSCSCLPNVVGTDCDQCAAGHWDM
ASGRGCRPCECNPSGSHSIHCNQFTGQCQCREGFTGRTCSAAQQQVCPDRHFGDVRVGCT
ECNCDFQGTEDVGCDKSTGHCLCRPGVTGPRCDQCQRDHCSTYPSCEPCHPCFHTYDGDI
QRLRLRLQQASLSNSSIGLPGGSHLGLWLSRAQGSVQQAQGILGHSSAAEQGLAQLGSAL
TAIREQMQGINPNFQFLDVSASLSEELEALNSSLLTISAQYQSKKTQYETSRSTDLSGAF
GTIRSAHQTSTNASSLAAAAATLLATSRESRRDAAGLEAAAATQSSKLLALRAQMASSPN
LTPTVNKICGGFRAETCTPAQCEGSLCPQDGGMACGDGLSCRGAKPLAGGALRVAGKAAG
ELDSLSARLRETAQLIKTTEASANQIQSNALRLIEQMSITRTQIEGDVRRAQQFIQQVRN
FLSDKDTDPATIQEISEFVLSLRLPTDAAAVLRKMNEIQNLATKLQCPEDILAQTAEDIA
KAKQLQQEAEQARNRANAVEGNVEEVVGNLRQANTVLLEAQGAIRGSGSSLRFIQERIEE
IEAVLGPAEKNVGSVAAQLAVLAEGLPGLQQTAGQNRLRAGDAQQTAAAASEEANGVQQA
FQQVKDMYAELKSRQGQSPALGAQGSRVQSIDLEAKALFEETWNMMLRMETLETEIQESN
RALVAKSARLSGLQEQVGRIRDAIHKRVTYYESCS
Download sequence
Identical sequences ENSGALP00000002049

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]