SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

  Home > Genomes > Gallus gallus 76_4 > ENSGALP00000006240

Domain assignment for ENSGALP00000006240 from Gallus gallus 76_4

Domain architecture

Domain assignment details

(show help)
Strong hits

Sequence:  ENSGALP00000006240
Domain Number 1 Region: 22-214
Classification Level Classification E-value
Superfamily vWA-like 2.08e-54
Family Integrin A (or I) domain 0.00037
Further Details:      
 
Domain Number 2 Region: 635-822
Classification Level Classification E-value
Superfamily vWA-like 2.92e-49
Family Integrin A (or I) domain 0.00073
Further Details:      
 
Domain Number 3 Region: 231-418
Classification Level Classification E-value
Superfamily vWA-like 2.23e-46
Family Integrin A (or I) domain 0.00034
Further Details:      
 
Domain Number 4 Region: 1035-1210
Classification Level Classification E-value
Superfamily vWA-like 9.79e-46
Family Integrin A (or I) domain 0.00072
Further Details:      
 
Domain Number 5 Region: 1427-1618
Classification Level Classification E-value
Superfamily vWA-like 8.35e-43
Family Integrin A (or I) domain 0.00094
Further Details:      
 
Domain Number 6 Region: 444-608
Classification Level Classification E-value
Superfamily vWA-like 5.72e-42
Family Integrin A (or I) domain 0.00047
Further Details:      
 
Domain Number 7 Region: 1640-1813
Classification Level Classification E-value
Superfamily vWA-like 1.49e-41
Family Integrin A (or I) domain 0.00048
Further Details:      
 
Domain Number 8 Region: 842-1017
Classification Level Classification E-value
Superfamily vWA-like 2.67e-38
Family Integrin A (or I) domain 0.00072
Further Details:      
 
Domain Number 9 Region: 1238-1412
Classification Level Classification E-value
Superfamily vWA-like 8.31e-38
Family Integrin A (or I) domain 0.0014
Further Details:      
 
Domain Number 10 Region: 2401-2593
Classification Level Classification E-value
Superfamily vWA-like 3.06e-29
Family Integrin A (or I) domain 0.017
Further Details:      
 
Domain Number 11 Region: 2619-2811
Classification Level Classification E-value
Superfamily vWA-like 2.4e-28
Family Integrin A (or I) domain 0.0027
Further Details:      
 
Domain Number 12 Region: 3069-3124
Classification Level Classification E-value
Superfamily BPTI-like 4.54e-19
Family Small Kunitz-type inhibitors & BPTI-like toxins 0.00023
Further Details:      
 
Domain Number 13 Region: 1837-2035
Classification Level Classification E-value
Superfamily vWA-like 0.0000000000000257
Family Integrin A (or I) domain 0.047
Further Details:      
 
Domain Number 14 Region: 2960-3042
Classification Level Classification E-value
Superfamily Fibronectin type III 0.00000869
Family Fibronectin type III 0.0049
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGALP00000006240   Gene: ENSGALG00000003923   Transcript: ENSGALT00000006250
Sequence length 3137
Comment pep:known chromosome:Galgal4:7:4752831:4805577:1 gene:ENSGALG00000003923 transcript:ENSGALT00000006250 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
MRKHRHLPLAAILGLLLSGFCSVGAQQQAAVRNVAVADIIFLVDSSWSIGKEHFQLVREF
LYDVVKALDVGGNDFRFALVQFSGNPHTEFQLNTYPSNQDVLSHIANMPYMGGGSKTGKG
LEYLIENHLTKAAGSRASEGVPQVIIVLTDGQSQDDVALPSSVLKSAHVNMIAVGVQDAV
EGELKEIASRPFDTHLFNLENFTALHGIVGDLVASVRTSMTPEQAGAKGLVKDITAQESA
DLIFLIDGSDNIGSVNFQAIRDFLVNLIESLRVGAQQIHIGVVQYSDQPRTEFALNSYST
KADVLDAVKALSFRGGKEANTGAALEYVVENLFTQAGGSRIEEAVPQILVLISGGESSDD
IREGLLAVKQASIFSFSIGVLNADSAELQQIATDGSFAFTALDIRNLAALRELLLPNIVG
VAQRLILLEAPTIVTEVIEVNKKDIVFLIDGSTALGTGPFNSIRDFVAKIVQRLEVGPDL
IQVAVAQYADTVRPEFYFNTHQNRKDVMANVKKMKLMGGTALNTGSALDFVRNNFFTSAA
GCRMEEGVLPMLVLITGGKSMDAVEQAAAEMKRNRIVILAVGSRNADVAELQEIAHERDF
VFQPNDFRLQFMQAILPEVLSPIRTLSGGMVIHETPSVQVTKRDIIFLLDGSLNVGNANF
PFVRDFVVTLVNYLDVGTDKIRVGLVQFSDTPKTEFSLYSYQTKSDIIQRLGQLRPKGGS
VLNTGSALNFVLSNHFTEAGGSRINEQVPQVLVLVTAGRSADPFLQVSNDLARAGVLTFA
VGVRNADKAELEQIAFNPKMVYFMDDFSDLTTLPQELKKPITTYVSGGVEEVPLAPTESK
KDILFLIDGSANLLGSFPAVRDFIHKVISDLNVGPDATRVAVAQFSDNIQIEFDFAELPS
KQDMLLKVKRMRLKTGKQLNIGVALDEVMRRLFVKEAGSRIEEGIPQFLVLLAAGRSTDE
VERPSGALKEAGVVTFAIKAKNADLSELERIAYAPQFILNVESLPRISELQANIVNLLKT
IQFQPTVVERGEKKDVVFLIDGSDGVRRGFPLLKTFVERVVESLDIGRDKVRVAIVQYSN
AIQPEFLLDAYEDKADLVSAIQALTIMGGSPLNTGAALDYLIKNVFTVSSGSRIAEGVPQ
FLILLTADRSQDDVRRPSVVLKTSGTVPFGIGIGNADLTELQTISFLPDFAISVPDFSQL
DSVQQAVSNRVIRLTKKEIESLAPDLVFTSPSPVGVKRDVVFLVDGSRYAAQEFYLIRDL
IERIVNNLDVGFDTTRISVVQFSEHPHVEFLLNAHSTKDEVQGAVRRLRPRGGQQVNVGE
ALEFVAKTIFTRPSGSRIEEGVPQFLVILSSRKSDDDLEFPSVQVKQVGVAPMVIAKNMD
PEEMVQISLSPDYVFQVSSFQELPSLEQKLLAPIETLTADQIRQLLGDVTTIPDVSGEEK
DVVFLIDSSDSVRSDGLAHIRDFISRIVQQLDVGPNKVRIGVVQFSNNVFPEFYLRTHKS
KNAVLQAIRRLRLRGGYPVNAGKALDYVVKNYFIKSAGSRIEDGVPQHLVVILGDQSQDD
VNRPANVISSTSIQPLGVGARNVDRNQLQVITNDPGRVLVVQDFTGLPTLERKVQNILEE
LTVPTTEGPVYPGPEGKKQADIVFLLDGSINLGRDNFQEVLQFVYSIVDAIYEDGDSIQV
GLAQYNSDVTDEFFLKDYSSKPEILDAINKVIYKGGRVANTGAAIKHLQAKHFVKEAGSR
IDQRVPQIAFIITGGKSSDDGQGASMEVAQKGVKVFAVGVRNIDLEEVSKLASESATSFR
VSTAQELSELNEQVLVTLAAAMKEKLCPGTTDVTRDCDLDVILGFDVSDVGAGQNIFNSQ
RGLESRVEAVLNRITQMQKISCTGSRAPSVRVAIMAQSRGGPVEGLDFSEYQPELFERFQ
GMRTRGPYFLTAETLKSYQNKFRSAPSGSTKVVIHFTDGTDDYLDQMKTASADLRRQGVH
ALLFVGLDRVKNFEEVMQLEFGRGFTYNRPLRVNLLDLDFELAEQLDNIAERTCCGVPCK
CSGQRGDRGLPGPIGPKGATGEIGYGGYPGDEGGPGERGPPGVNGTQGFQGCPGHRGTKG
SRGFPGEKGELGEMGLDGIDGEEGDKGLPGSSGEKGFSGRRGSKGAKGERGERGDRGLRG
DPGESGADNTQRGTRGQKGEIGQMGEPGPAGQRGQDGGVGRKGMAGRRGPIGVKGTKGAL
GQPGPAGEQGMRGPQGPPGQIGTPGIRGEQGIPGPRAGGGQPGAPGERGRIGPLGRKGEP
GNPGPRGPNGQQGPRGEMGDDGRDGIGGPGPKGRKGERGFVGYPGPKGGPGDRGGAGGPG
PKGNRGRRGNAGNPGTPGQKGEIGYPGPSGLKGDKGPSISQCALVQNIKDKCPCCYGPKE
CPVFPTELAFAIDTSSGVGRDVFNRMKQTVLRVVSNLTIAESNCPRGARVALVTYNNEVT
TEIRFADARKKSSLLQQIQNFQATLTTKPRSLETAMSFVARNTFKRARSGFLMRKVAVFF
SNGETRASPQLNDAVLKLYDAGVTPVFLTSRQDAVLERALEINNTAVGHAIILPTSGSQL
NDTIRRLLTCHVCLDVCEPDPICGYGSQRPVFRDRRAAPTDVDTDIAFIMDSSASTTPLQ
FNEMKKYISHLVSNMEISSEPKISQHHARVAVLQQAPYDHETNSSFPPVKTEFSLTDYGS
KEKIINYLHNQMTQLYGTMAMGSAVEHTVAHVFESAPNPRDLKVIVLMITGKMEKQELEY
LREAVIDAKCKGYLFVILGIGKNVDVKNIYSLASEPNDVFFKLVSKPGELHEEPLLRFGR
LLPSFIRSDFAFYLSPEIRKQCKWLQADQTPKSPGHTGQKAVYIAPNGTVTQTISTTTTL
STTFKPAASTSAHAKTTTASTTAQTRATERPTESTTVQVNATVQSQGSTAANTKATSRTT
TSTTAAAASGRRRQGAKMNDIQITDVTENSARLRWASPEPHNAYVFDLAITLAHDHSLVL
KQNVTGTERVIGGLRSGQKYLVFITGYLKSQPKVTYTGTFSTKTPAQPKVALANMMLNAE
PLEGPENVMDICLLQKEEGTCRDFVLKWHYDLKTKSCARFWYGGCGGNENRFNTQKECEK
ACSPGNISPGVVTTIGT
Download sequence
Identical sequences F1P2F0
NP_990865.2.86415 ENSGALP00000006240 9031.ENSGALP00000006240 ENSGALP00000006240

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

Please send feedback, comments or questions to superfamily@cs.bris.ac.uk or use the feedback form.

© Copyright 2013 The SUPERFAMILY authors and Julian Gough.