SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGALP00000012434 from Gallus gallus 76_4

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGALP00000012434
Domain Number 1 Region: 165-234
Classification Level Classification E-value
Superfamily HLH, helix-loop-helix DNA-binding domain 1.09e-16
Family HLH, helix-loop-helix DNA-binding domain 0.001
Further Details:      
 
Weak hits

Sequence:  ENSGALP00000012434
Domain Number - Region: 8-79
Classification Level Classification E-value
Superfamily beta-sandwich domain of Sec23/24 0.0968
Family beta-sandwich domain of Sec23/24 0.053
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGALP00000012434   Gene: ENSGALG00000007679   Transcript: ENSGALT00000012448
Sequence length 385
Comment pep:known chromosome:Galgal4:12:15538059:15554870:1 gene:ENSGALG00000007679 transcript:ENSGALT00000012448 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MLEMLEYNHYQVQTHLENPTKYHIQQAQRQQVKQYLSTTLANKHANQALSLPCPNQPGDH
VMPPGTGSSAPNSPMAMLTLNSNCEKEMDDVIDDIISLESSYNEEILGLMDPALQMANTL
PVSGNLIDLYGNQSMPPPGLNISNSCPANLPNIKRELTESEARALAKERQKKDNHNLIER
RRRFNINDRIKELGTLIPKSNDPDMRWNKGTILKASVDYIRKLQREQQRTKELENRQKKL
EHANRHLLLRIQELEMQARAHGLSLVPSTGICSPDMVNRVIKQEPVLDNCNQDLMPHHTD
LSCTTTLDLTDGTITFSDNLGNVTEPTGTYSVPAKMGSKLEDILMDDTLSPVGVTDPLLS
SVSPGASKTSSRRSSVSMEDTDHAC
Download sequence
Identical sequences Q9IAU0
ENSGALP00000012434 XP_015148460.1.86415

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]