SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGALP00000018148 from Gallus gallus 76_4

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGALP00000018148
Domain Number 1 Region: 131-375
Classification Level Classification E-value
Superfamily vWA-like 6.39e-84
Family Integrin A (or I) domain 0.0000000665
Further Details:      
 
Domain Number 2 Region: 373-460
Classification Level Classification E-value
Superfamily Integrin domains 3.4e-23
Family Integrin domains 0.00034
Further Details:      
 
Domain Number 3 Region: 624-706
Classification Level Classification E-value
Superfamily Integrin beta tail domain 1.14e-17
Family Integrin beta tail domain 0.0011
Further Details:      
 
Domain Number 4 Region: 22-80
Classification Level Classification E-value
Superfamily Plexin repeat 0.00000000000146
Family Plexin repeat 0.001
Further Details:      
 
Domain Number 5 Region: 581-622
Classification Level Classification E-value
Superfamily EGF/Laminin 0.000000248
Family Integrin beta EGF-like domains 0.0018
Further Details:      
 
Domain Number 6 Region: 540-578
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000123
Family Integrin beta EGF-like domains 0.0094
Further Details:      
 
Domain Number 7 Region: 82-156
Classification Level Classification E-value
Superfamily Integrin domains 0.00000199
Family Integrin domains 0.0017
Further Details:      
 
Weak hits

Sequence:  ENSGALP00000018148
Domain Number - Region: 508-540
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0307
Family Integrin beta EGF-like domains 0.024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGALP00000018148   Gene: ENSGALG00000011141   Transcript: ENSGALT00000018170
Sequence length 791
Comment pep:known_by_projection chromosome:Galgal4:7:21293508:21321944:1 gene:ENSGALG00000011141 transcript:ENSGALT00000018170 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
KRMGIELLCLFFLFLQRNNHVQGTCSQESGVTCEDCLLSGPHCAWCSQENYTDSAGIHGR
CDTPENLLSKGCQLHLIEFPVSEVEIHRNKPLTIATQKDNSDVTQISPQKLTLRLRPGHE
ETIQIKVRQSEDYPIDLYYLMDLSASMDDDLNTIKELGSTLSKEMSKLTSNFRLGFGSFV
EKPVSPFIKTTAEEINNPCRSVPYECLPTFGYKHVLSLTNDAERFNEIVKGQRISANIDT
PEGGFDAIMQAAVCKEKIGWRNDSLHLLVFVSDADSHFGMDSKLAGIVIPNDGNCHLDHN
NEYSMSTILEYPTIGQLIDKLVQNNVLVIFAVTNEQVHTYENYAKLIPGATVGRLQEDSG
NILQLIIAAYQELRSEVELEVSGDTEGLDLSFTAICNNGTFLPHQRKCSHVKVGDTVSFN
VTISLPTCDKTTRHVVIKPVGLSDMLEMEILPQCSCGCQAEAESNSSKCNKGKGSFECGV
CVCHPGYMGPHCECDENALSTGSCKGSVEQSSCSGRGSCYCGQCVCHPSMYGRVYGAHCE
CDDFSCVRHRGLQCGGNGDCDCGECVCHSGWTGEYCNCTTDTNSCISEDGTLCSGRGECI
CGSCVCIHPGASGQTCEKCPLCGDPCSSRRSCVECHLASDDKLQGECSEKCKSVDATVST
AEDFLEDKSIPCSFQAENECITTFLLAVDEQGRTVIHSIKQKDCPQLPNIPMIMVGVTLA
ILLIGIVLLCIWKLLVSVQDRKEVAKFEAEKSKVKWQTETNPLYRGSTSTFKNVTYKNQE
KQKGAMAADFY
Download sequence
Identical sequences ENSGALP00000018148

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]