SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGALP00000018521 from Gallus gallus 76_4

Domain architecture


Domain assignment details

(
show help)

No Significant Hits.

Weak hits

Sequence:  ENSGALP00000018521
Domain Number - Region: 189-218
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.00184
Family Classic zinc finger, C2H2 0.02
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGALP00000018521   Gene: ENSGALG00000011368   Transcript: ENSGALT00000018544
Sequence length 809
Comment pep:known_by_projection chromosome:Galgal4:5:49479157:49490005:1 gene:ENSGALG00000011368 transcript:ENSGALT00000018544 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
SLAPIQSKTVMLSQSVGRNSSVPGLGIINPQIIKIQPVTGPEQQQQLFLHSSSESPIQLL
MQKPLPSHGSVPVNKIPTSKVLNGQKTARATVSPARSSNTAASSTNTLMPCLEKKQKDDK
LKKSLKVKTRSGRISRPPKYKAKDYKFIKMEDLADSHQSDSDDYSELSIEDDEEGKVKGK
DALFNSSNYNLKPKMFKCQTCEKSYIGKGGLARHYKLNPGHGQLESVPQKTPLNKPNGNY
SVICGKREKRSILTSAVCIVVYLFPCVAFILFKACKSAESGNLLAEQQNESSSGHRGPIT
AKGPGRPRRPKRRGRPRMGGRSRCSGRLSRPGQSPSKSLSSVSTERNVFRRKARLKELIQ
QCDNEDLMELALPRLTELVTVYEFLLMKVEKGCPAKAYFPDVYREFEELHNMVKKMAYDY
LSNSDFLSCQQPIEIKDTKVAESLGITEITTGEQKMQGVDPCSQHIIKMVSEQVPVETLG
EKRLAESSGEELLPSAKRTKLEDVMENVNNAYSSQDEVKEKSGNLCTLFEKDGNLFMFSN
SVVFTGFISQLASQVLQKQLFYWKVLTGKRGSFLSALSLRVVMVHNLCVSSGRAAEEEAM
CMSFLLPQWNAGVESSELCGSWGRGRTGGYPVSQANSGLERKAKCGPGSANTAHKSHNSE
VRINDENSADASLLHTEIVLPVEEMEKAFSTHVPINYPHGAQAELHQNPVQEASLSAGVT
HDCAYNNVSEFPCGTEEQHELENAVAVDQTVAFEITDGSHDFLTQGHEQIFIQTTDGLIL
SHPDAAVLSQAEGIVIVTDSDGTTMHIRT
Download sequence
Identical sequences ENSGALP00000018521

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]