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  Home > Genomes > Gallus gallus 76_4 > ENSGALP00000018843

Domain assignment for ENSGALP00000018843 from Gallus gallus 76_4

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSGALP00000018843
Domain Number 1 Region: 678-858
Classification Level Classification E-value
Superfamily vWA-like 2.09e-52
Family Integrin A (or I) domain 0.00032
Further Details:      
 
Domain Number 2 Region: 1282-1470
Classification Level Classification E-value
Superfamily vWA-like 1.57e-51
Family Integrin A (or I) domain 0.00056
Further Details:      
 
Domain Number 3 Region: 483-671
Classification Level Classification E-value
Superfamily vWA-like 6.94e-49
Family Integrin A (or I) domain 0.00099
Further Details:      
 
Domain Number 4 Region: 93-253
Classification Level Classification E-value
Superfamily vWA-like 7.99e-48
Family Integrin A (or I) domain 0.00071
Further Details:      
 
Domain Number 5 Region: 885-1051
Classification Level Classification E-value
Superfamily vWA-like 7.59e-44
Family Integrin A (or I) domain 0.00094
Further Details:      
 
Domain Number 6 Region: 1061-1269
Classification Level Classification E-value
Superfamily vWA-like 2.07e-38
Family Integrin A (or I) domain 0.0014
Further Details:      
 
Domain Number 7 Region: 2254-2441
Classification Level Classification E-value
Superfamily vWA-like 8.9e-31
Family Integrin A (or I) domain 0.0034
Further Details:      
 
Domain Number 8 Region: 290-469
Classification Level Classification E-value
Superfamily vWA-like 2.7e-30
Family Integrin A (or I) domain 0.0012
Further Details:      
 
Domain Number 9 Region: 2045-2218
Classification Level Classification E-value
Superfamily vWA-like 1.53e-28
Family Integrin A (or I) domain 0.0078
Further Details:      
 
Domain Number 10 Region: 1478-1682
Classification Level Classification E-value
Superfamily vWA-like 1.47e-16
Family Integrin A (or I) domain 0.043
Further Details:      
 
Domain Number 11 Region: 4-64
Classification Level Classification E-value
Superfamily vWA-like 0.0000964
Family Integrin A (or I) domain 0.013
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGALP00000018843   Gene: ENSGALG00000011567   Transcript: ENSGALT00000018866
Sequence length 2471
Comment pep:novel chromosome:Galgal4:2:42137315:42175947:1 gene:ENSGALG00000011567 transcript:ENSGALT00000018866 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
QINKGVPQTAAVVRNGQAEDNTQNAATAVKDASIMLYAIGIKDLALPELQEIVTNDAVII
FYKSFVEEVTGLVTQFAHENIIAKSTFIIFKIIKATVADVVFIVDTSTSIAQENFQKVKN
FLSSLVSSLDIGLDMIRVGLAQYSDEAYQVFLLNQYLLKSDVLDQIGNLPYRGGETYTGR
ALDFVSTRYFTESAGSRAKGYVPQLAVLITSGESNDEVEQPAKKLRYRGISIYVVGIGIQ
NTTELQQIASDTSLTLLKTQFRKNILGEQVLMGLLLSLHSKPGLGSFAKRYADVIFLIDS
TENMKPSTSERVKHFISQVVRQLDVGLNKYRIGLAQFSGIGKVEFLLNTYENKEEVLDHI
QRSIAFTGGSLQNESAIEFLKKTFLMNGAGSRLSEGTPQVVVIFTSSGSRNSIMEEAWVL
EDMGVKVTLVDVEYFDKIEATVREPSSKVYQIYEVESIDPVQQNIVNNIETSLQMLYDLD
SMCSSATVADIVFLVDESSKIGSKNFQLIRAFLLKIVNALDIAPSNVRVGLVLYSNEPRL
EFTLDTFKDKLEILNYLKNLPYRGGQAYTGIAIEFLRNKVFTQEAGSRKKQGVQQIAVVI
TDGQSLDDYIEPASKLRRESVTVYAVGVKNITEGSKLDKIATYPPRNHVTTLKYFLQLSN
IRWKIKKQLNNIYKQLGCMDTEEADIYFLIDGSGSIYPSDFKDMKTFMNEVIRIFQLGAN
NVRFGVVQYASESKTEIIIGQHSQMMRLTEAIENINQIGGGTRTGNALRSMKSLFQMAYR
ENVPQILIVITDGKSEDKVNQAARDLRQQGIVIYAIGIKDAVQQELEEIAETKNRMFFVN
DFDSLKHIKHEIVQEVCSTNGFAVSRLDNLSRYKLYQSPSKIKNVRADIVFLVDSSNSIR
AAEFQKIKDFMQSFVIKVDVGLDNVRIGLIQFSSEIREEFQLDRYSTIADVQRAIQEMQQ
IKLGTLTGKALTFAASYFDRPKGGRPELKQYLIVITDGEAQDSVKSPARAIRDKGITIYA
IDMLQANNSQLVEITGAQDKVFFESEMNFSEKQILFEICNLQKCTCFFFFFLLTLYKTVC
KRAEAADIMFVVHGSSGVTDLQFKNMLQLVEAVVNNSVVGKDNVQFGVLVYSSNPEVQFS
LNSYASKSQIREAVFSLKPLSGQPFTARALSFARQTFGVNYGGRASSLAVARILVLITDE
PTVPSDRDNLPMAIRALKEDKIVLIAVGVSKASREELEEITEDQKRLFFAQSYDALENMH
ENLTQTVCESSKPECPKVVQMPPSERTDNHVADLIFLIDGSESISENSFSTMKTFMKDVV
DSFDISRDKVRLGVVQYSQEPQREFYLNEFYSDTIIKEQINRIEQLRSSTFTGKGLRFVQ
SLFESANGGRKNQGVSQNLVVITDGYSADSVDDAAMALRSNGIHVFAVGVGIVNSFELLR
IAGDARRVFTVENFNALKTIKSTIINEICEPEDPASQDCNIDLAIAIDISRHMQSASSLL
LKQKLQTFLPRLLFQMKSLPSISCNAGSPVNIRFKFQVLSQTKQFLFNSDFEDYDEEIIQ
KFLDVQTAVDTYLNVDFLQAVQETFFSATSAKVKVLLVFSDGLDDSLEDLRKAANAFRLK
GLDALLLVGLDNTQNLTTLREIEFGRGFGYNEPLSVGFPEIASILQRNLDTIAERKCCNV
ICKCLGETGDHGGWGNPGRKGSTGYRGSPGHPGDEGGIGDRGPAGFNGTRGDRGCAGARG
RKGSRGHQGSQGEHGESGFDGIDGEQGEHGSPGFPGEKGSPGKRGRKGPRGEPGERGEPG
LRGDHGDPGIDNNIAGPKGEKGKPAWQGDPGPRGLQGEQGHAGPEGGEGRRGAPGIKGEQ
GEMGETGYPGDPGLPGPQGPRGPQGIRGPPGPQGMPGSQASLGPPGLPGSNGKPGARGAK
GEPGDRGEKGPVGPPGPRGIPGVDGRDVYGPEGNKGAKGESGFIGYPGPEGEDGDPGISG
AKGPKGIRGRRGNAGTPGSLGDPGDQGPSGPMGAKGQRGTVLMEPCELVNFTRKNCPCSS
DTDICPVYPTEVVFALDMSEGVTPAAFERMRNIVMSLLKTIKISESNCPTGARVSIVSFN
TNIRYLIRFSEFQKHNLLLQAVQRIPLERSTGKRSIGTAMRFVARNVFKRVRQGILTRKV
AIFFASGPSQEDVVESTAVLELSAWDITPVVIAFTELPNVRRAFSIDDTGRFQLFVWERQ
QDENLENITNCTLCFDKCKPSTNCKVPISPPLLMDMDITYIMDSSRSISSEDFQRAKDFV
SNMIDQFVIAEQPSESLGGTRVALVQQAPRGFLPDRNKIPVALEFDLETYNNKDLMKKHI
QESVHQLEGPSAIASALQWTVENVFFKAPRQRKHRVVFAIVGSKTSTQDREKLREISLGV
KCQGFTMFTLALGNDLSDSELMELSSSPTDQHLLILGRTSKSEMIYAQRFARAFLNLLQH
NRYLQLSPNIR
Download sequence
Identical sequences ENSGALP00000018843

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.