SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSGALP00000027736 from Gallus gallus 69_2

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSGALP00000027736
Domain Number 1 Region: 171-197,227-466
Classification Level Classification E-value
Superfamily Nuclear receptor ligand-binding domain 5.37e-61
Family Nuclear receptor ligand-binding domain 0.00000000409
Further Details:      
 
Domain Number 2 Region: 118-196
Classification Level Classification E-value
Superfamily Glucocorticoid receptor-like (DNA-binding domain) 2.75e-24
Family Nuclear receptor 0.0000286
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSGALP00000027736   Gene: ENSGALG00000017195   Transcript: ENSGALT00000027789
Sequence length 486
Comment pep:known chromosome:WASHUC2:1:187459521:187494568:1 gene:ENSGALG00000017195 transcript:ENSGALT00000027789 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
PAAPPPFLGAKAAPADFAQPPRAGQEPSLECVLYKAEPPLLPGAYGPPAAPDSLPSTSAA
PPGLYSPLGLNGHHQALGFPAAVLKEGLPQLCPPYLGYVRPDTETSQSSQYSFESLPQKI
CLICGDEASGCHYGVLTCGSCKVFFKRAMEGQHNYLCAGRNDCIVDKIRRKNCPACRLRK
CCQAGMVLGGRKFKKLNKMKVVRTLDVALQQPAVLQDETQSLTQRLSFSPNQEIPFVPPM
ISVLRGIEPEVVYAGYDNTKPETPSSLLTSLNHLCERQLLCVVKWSKLLPGFRNLHIDDQ
ITLIQYSWMSLMVFAMGWRSYKHVSGQMLYFAPDLILNEQRMKESSFYSLCLSMWQLPQE
FVRLQVSQEEFLCMKALLLLNTIPLEGLRSQSQFDEMRTSYIRELVKAIGLRQKGVVANS
QRFYQLTKLMDSMHDLVKQLHLFCLNTFLQSRALSVEFPEMMSEVIAAQLPKILAGMVKP
LLFHKK
Download sequence
Identical sequences 9031.ENSGALP00000027736 ENSGALP00000027736

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]