SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for jgi|Selmo1|119414|e_gw1.60.469.1 from Selaginella moellendorffii

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  jgi|Selmo1|119414|e_gw1.60.469.1
Domain Number 1 Region: 56-339
Classification Level Classification E-value
Superfamily WD40 repeat-like 6.72e-30
Family WD40-repeat 0.0087
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) jgi|Selmo1|119414|e_gw1.60.469.1
Sequence length 340
Sequence
MDAVELDGNADAVEFCPVRSHSHALAAATYNLVEATPESPARRLGSVSLFEVIADPNPRL
RLVDRKKTSGVFDIRWRPSNQGNDAVLAQAGADGVLTMYALQGSDSNSLEKFTELEVCDS
AMCLSVDWNPFATSSQQELVVSHSNGSISLVSMSRERLELDRSWEAHGFEAWTATYDAWI
QGLVYTGGDDSQFCGWDLRASLDSPVFRDAKSHEMGVCCVQSNPLWENVVATGSYDERLR
LWDARMAHRPFATHKIGLGGGVWRLKWHPVDKGTLVAACMHSGFAIVAVDEQRDVGVGVV
KEYKEHKSLAYGVDWSKNNESLPLVASCSFYDNALHLWKS
Download sequence
Identical sequences D8SKQ9
XP_002983880.1.77236 jgi|Selmo1|119414|e_gw1.60.469.1

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]