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Domain assignment for jgi|Selmo1|445396|estExt_fgenesh2_pg.C_560115 from Selaginella moellendorffii

Domain architecture


Domain assignment details

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Strong hits

Sequence:  jgi|Selmo1|445396|estExt_fgenesh2_pg.C_560115
Domain Number 1 Region: 305-446,537-598,630-765,879-1088
Classification Level Classification E-value
Superfamily ARM repeat 2.82e-45
Family Clathrin adaptor core protein 0.095
Further Details:      
 
Weak hits

Sequence:  jgi|Selmo1|445396|estExt_fgenesh2_pg.C_560115
Domain Number - Region: 1054-1152
Classification Level Classification E-value
Superfamily ARM repeat 0.0834
Family PBS lyase HEAT-like repeat 0.068
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) jgi|Selmo1|445396|estExt_fgenesh2_pg.C_560115
Sequence length 1675
Sequence
MAPCFVIPQSGGLEELEKDCGEEDFLVVQRDFSTADGEELAKEVAFQLGDNEVTCIEEQA
IFDQLFAIVKNFPSLQPSTKRLIIESLCSNFTLLIASIASLKREDAESDPAFLCQQIHSQ
QNALKLYSFFLQQIYTLEEAPCSDSQKTKASTKSKQPRKKNPTLSWKWEDFRARIVSSVT
RVLEADLQLLYGMARPENGLLNFLAKFGLKLLENPTVMKDKEAKDEVCKFLATCAVKYDY
HEQLLPSLIDLLHKCEHVPIPLADLVTVSDKSYGDNTLAVGILREVGMTGQAEYNRLPTV
ADNVKLFLVELADRLPKVLAANLSVLMPHFGGESYKIRNALVTVLGRLVVKAFGDNDSNL
SEDIRLRNKQAMLDVLIERTRDTNAFTRACVLQTWGYLCEQNSLSISLWNQVVDIAAGRL
HDKAVLVRKNALQLLTTLLEYNPFGPMLKTGRFEATLEIYKLQLEKMTQGNGTSGETETE
TETARFKPQEEAVNDNETQDSAIFESQGPPETQKRCDIGSLEQTRALVASLESALHFSRT
MASTIPVISQLFSSSAIFDVQQSIQFLTKCHKFSIDGAEECMRKMLPLERSIYEAVEGAF
VVTYIKKSPQETASNLLQLVLEAPVGHLTSIEALLISLVKKREIPAGTEPALWDIFTFNS
VGVTPEQCRCALSLLCMIAKASPKVFSSRIQNVVDIGFGRWAKQESLLARFACLALQRLT
IEDKQQLQPGHKVFSILASLISDQLLPDEIWYSAAEQAISAIYVIHPVPEAFMSALMLKF
LDAALQKTDEGLDSSILSRFLFATGHVALKHLVYIETCVRAIRKQKCDREREAAAVDANA
AEDGVSSSKDEGINAELGVAAAEDVKLDYLLEKAEREIVSGSETRKLLIGSISPLVSKLC
KNSTVLQKFPQLRSSVVLCLCKLMAVDSNYCDANLQLLFTLAQNSPEDAIRSNCIISLGD
IAFRFPNLLEPWTENIYARLHDRSDYVRKNAVLVISHLRQLFGIYIDRHLQVKGHISEMA
IRTQDENSRISELAKLFFSELSKRGTSPIYNFLPDILSRLSSSTNISGDTFRNIMQFLLD
FIKKDRQIEGLIEKLCNRFVGTSDRAQWQAIAYCLSQLTFTDKAMKRLIDLFKQFANALV
DEQVLDSFKTICSKAKKLAKQDYRQLLEEFELKITACHEQKREEEVAAMEAQHVADNGIR
CESNGASKNDEEQASSTVSSNGSTSGEDEEVCPRTPVASSVKPGSVDGDDYSSGSEHRSH
VSTNSRESSGGSMNGDDSSTKCKHRSRVSTRSKVTLENSERSPASIDSYAKRENSESLDG
GHTDEEEENPLRLSAGCILRYSILGFVPRSASIPLPTASPGRMAEAEIEELLDFDGSDYE
FGSDEGAGEEEDVDYRVVGEDASMGQDDAADPVEGQAMGMDSLEISGSVEPQREPDRAIE
RGRRMPESRSTRHSSKTDLEDGEFFDMAPMVNSKKQAEHGVVKDGKLSRKQHSNETMRAL
SDREAERNTGSRQDRKRRREHDYERHQYSSPRSRKQPHERYTGRYDRPHGGDRRYDRVGD
FPDSRIRGPPFYRPNYSPGIMGPGRPDMNHVRACTAGLEIFSPAQLQELLNQEHMLRSQQ
MLHLARLAYGIRHNFSDELHGGTSRSPRPPIVLSSNGTRPRHPRWCWCIWFRKTS
Download sequence
Identical sequences D8SI93
XP_002983019.1.77236 jgi|Selmo1|445396|estExt_fgenesh2_pg.C_560115

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