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Domain assignment for ENSCPOP00000000340 from Cavia porcellus 76_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000000340
Domain Number 1 Region: 502-556
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000132
Family Classic zinc finger, C2H2 0.011
Further Details:      
 
Domain Number 2 Region: 543-599
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0000000000153
Family Classic zinc finger, C2H2 0.031
Further Details:      
 
Domain Number 3 Region: 197-312
Classification Level Classification E-value
Superfamily SET domain 0.0000632
Family Histone lysine methyltransferases 0.084
Further Details:      
 
Weak hits

Sequence:  ENSCPOP00000000340
Domain Number - Region: 323-355
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000134
Family Classic zinc finger, C2H2 0.038
Further Details:      
 
Domain Number - Region: 750-774,808-833
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.000173
Family Classic zinc finger, C2H2 0.031
Further Details:      
 
Domain Number - Region: 671-736
Classification Level Classification E-value
Superfamily Expressed protein At2g23090/F21P24.15 0.0118
Family Expressed protein At2g23090/F21P24.15 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000000340   Gene: ENSCPOG00000000389   Transcript: ENSCPOT00000000392
Sequence length 1130
Comment pep:known_by_projection scaffold:cavPor3:scaffold_19:16318121:16371914:1 gene:ENSCPOG00000000389 transcript:ENSCPOT00000000392 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MDSKDEGAHVWAPSAEHEQGTTQVHFVPDAGTVAQIVYTDEQVRPPQQVVYTADGASYTS
VDGPEHTLVYIHPVEAAQTLFTDPGQVAYVQQDTTTQQTPFPVPNQVLPSIESVDGSDPL
ATLQNPMDDGEDTDLDDWEPDPPRPFDPHDLWCEECNNAHSSVCPKHGPLHPIPNRPVLT
RARASLPLVLYIDRFLGGVFSKRRIPKRTQFGPVEGPLVRGSELKDCYIHLKVSLEKGDR
KDRDLHEDLWFELSDESLCNWMMFVRPAQNHLEQNLVAYQYGHHVYYTTIKNVEPKQELK
VWYAASYAEFVNRKIHDISEEERKVLREQEKNWPCYECNRRFISSEQLQQHLNSHDEKLD
VFSRTRGRGRGRGKRRFGPGRRPGRPPKFIRLEITSENGEKSDEGTQDLLHFPAKEQFDE
AEPAPLNGLDPPEQTAISVPQLPQEAQASLEHEPETHTLHLQPQHEESVVPAQSTLTADD
MRRAKRIRNAALQHLFIRKSFRPFKCLQCGKAFREKDKLDQHLRFHGREGNCPLTCDLCN
KGFISSASLESHMKLHSDQKTYSCIFCPESFDRLDLLKDHVAIHINDGYFTCPTCKKRFP
DFIQKVKRNIKSWYIIHFESSTDCLPDSAFIRRRDELLLYLLKAERKRDTLCSPCGEAVP
RRKDKLREHMQRMHNPEREAKKADRISRSKTFKPRITSTDYDSFTFKCRLCMMGFRRRAF
QVNHLSKRHPDMKIEEVPELTLPIIKPNRDYFCQYCDKVYKSASKRKAHILKNHPGAELP
PSIRKLRPAGPGEPDPMLSTHTQLTGTIATPPVCCPHCSKQYSSKTKMVQHIRKKHPEYA
QLPNSIHTPLTTAVISATPAVLTTDSATGETVVTTDLLTQAMTELSQTLTTDYRTPQGDY
QRIQYIPVSQSTSGLQQPQHIQLQVVQVAPATSPHQSQQSTVDVGQLHDPQTYTQHAIQV
QHIQVTESAAPAPASSQVAGQPLSPSAQQVQQGLSPSHIPGNSSSQGQARSSVQHTYLPN
AWNSFRGYSSEIQMMTLPPGQFVITDSGVAAPVTAGQVKTVAPGHYVLSESQPELEEKQT
SALPSGVQVQPPTHSDALEPPPSSQQQPTQYIITATANGSGSSEVHISKP
Download sequence
Identical sequences 10141.ENSCPOP00000000340 ENSCPOP00000000340 ENSCPOP00000000340

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