SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCPOP00000000548 from Cavia porcellus 76_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCPOP00000000548
Domain Number 1 Region: 134-254
Classification Level Classification E-value
Superfamily EF-hand 2.4e-35
Family Osteonectin 0.023
Further Details:      
 
Domain Number 2 Region: 223-315
Classification Level Classification E-value
Superfamily Thyroglobulin type-1 domain 4.58e-27
Family Thyroglobulin type-1 domain 0.00088
Further Details:      
 
Domain Number 3 Region: 73-119
Classification Level Classification E-value
Superfamily Kazal-type serine protease inhibitors 0.000000000236
Family Ovomucoid domain III-like 0.0087
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000000548   Gene: ENSCPOG00000000622   Transcript: ENSCPOT00000000627
Sequence length 316
Comment pep:known_by_projection scaffold:cavPor3:scaffold_17:25506052:25789709:-1 gene:ENSCPOG00000000622 transcript:ENSCPOT00000000627 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
DDYFRNWNPKKPFDQALDPSKDPCLKVKCSPHKVCVTQDYQTALCVSRKHLLPRQKKGNV
AHKLWVGPSNLVKCKPCPVAQSPMVCGSDGHTYTSKCKLEFHACSTGKSLTTLCDGPCPC
IPEPEPPKHKTEKNACTDKELRNLASRLKDWFGALHEDANRVIKPTSSDTAQGRFDTSIL
PICKDSLGWMFNKLDMNYDLLLDHSEINAIYLDKYEPCIKPLFNSCDSFKDGKLSNNEWC
YCFQKPGGLPCQNEMNRIQKLSKGKSLLGAFIPRCNEEGYYKATQCHGSTGQCWCVDKYG
NELAGSRKQGAVSCGE
Download sequence
Identical sequences ENSCPOP00000000548 10141.ENSCPOP00000000548 ENSCPOP00000000548

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]