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Domain assignment for ENSCPOP00000000690 from Cavia porcellus 76_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000000690
Domain Number 1 Region: 38-128
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 2.52e-38
Family SCAN domain 0.0000405
Further Details:      
 
Domain Number 2 Region: 351-408
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.41e-24
Family Classic zinc finger, C2H2 0.0028
Further Details:      
 
Domain Number 3 Region: 311-361
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 3.2e-19
Family Classic zinc finger, C2H2 0.0083
Further Details:      
 
Domain Number 4 Region: 393-445
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 6.99e-19
Family Classic zinc finger, C2H2 0.0034
Further Details:      
 
Domain Number 5 Region: 197-238
Classification Level Classification E-value
Superfamily KRAB domain (Kruppel-associated box) 0.00000000000863
Family KRAB domain (Kruppel-associated box) 0.0045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000000690   Gene: ENSCPOG00000000772   Transcript: ENSCPOT00000000777
Sequence length 457
Comment pep:known_by_projection scaffold:cavPor3:scaffold_4:23136199:23139778:1 gene:ENSCPOG00000000772 transcript:ENSCPOT00000000777 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAAAQEPQDQAPGEGEGLLIVKIEDSSWEQETAQQEDSRDSEACRQRFRQFCYGEVGGPH
EAFSQLWELCCRWLRPELRTKEQILELLVLEQFLTVLPGEIQAQVRGQCPGNGEEAVALV
EDLQKQPVKAWSQDVPSENEEAEAMIQTSQAKGMVGIWSRLLASQRLYSFPSAQLPALLK
EGNTRETTDACFASGVHAPVALGDIPFYFSREEWGSLDPAQRDLFWDIKRENSRNTTPGL
GLQSQSKKVLLEEVVKVLPGQADGEGTVSWNPRDAEAWEKEHQPAVSLGRPVGARRGRPP
ARRRQFRDLAAEKPHSCGQCGKRFRWGSDLARHQRTHTGEKPHKCPECDKSFRSSSDLVR
HQGVHTGEKPFSCNECGKSFSRSTYLADHQRIHTGEKPFGCSDCGKSFSLRSYLLDHRRV
HTGERPFGCGECDKSFKQRAHLIAHQSLHARMAQPVG
Download sequence
Identical sequences 10141.ENSCPOP00000000690 ENSCPOP00000000690 ENSCPOP00000018274

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