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Home > Genomes > Cavia porcellus 76_3 > ENSCPOP00000002841

Domain assignment for ENSCPOP00000002841 from Cavia porcellus 76_3

Domain architecture

Domain assignment details

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Strong hits

Sequence:	ENSCPOP00000002841
Domain Number 1	Region: 358-540
Classification Level	Classification	E-value
Superfamily	NTF2-like	2.25e-61
Family	NTF2-like	0.00000147
Further Details:

Domain Number 2	Region: 92-186
Classification Level	Classification	E-value
Superfamily	RNA-binding domain, RBD	5.9e-32
Family	Non-canonical RBD domain	0.00012
Further Details:

Domain Number 3	Region: 191-345
Classification Level	Classification	E-value
Superfamily	L domain-like	3.74e-31
Family	mRNA export factor tap	0.00000287
Further Details:

Domain Number 4	Region: 537-573
Classification Level	Classification	E-value
Superfamily	UBA-like	0.0000918
Family	TAP-C domain-like	0.0025
Further Details:

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by

Molecular Function
Biological Process
Cellular Component

Molecular Function	IC (bits)	H-Score

Cellular Component	IC (bits)	H-Score

Biological Process	IC (bits)	H-Score

Protein sequence

External link(s)	Protein: ENSCPOP00000002841 Gene: ENSCPOG00000003136 Transcript: ENSCPOT00000003179
Sequence length	573
Comment	pep:novel scaffold:cavPor3:scaffold_26:2078775:2085277:1 gene:ENSCPOG00000003136 transcript:ENSCPOT00000003179 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	DGTSALRRRRGNGRASYGNFDRRSTRHEHSRHGLLSSHFPKDDSNAIKDFYEDRRVRYIP YVRQHHRSRGRGCDVHKSRVNVCRDPQLRDREMKMDTRDGTRQSWFKVTIPLGRTYDKTW LMNLIQCHCSVSFSPVDFHYIENRALFFVQGVSTASAIKDASNKIYDEENQKIRIFVNPS AVPYSVQNKFTPEQMKQLKLTMKKRYDVSQKALNLQKLRFDPDLMDHEIDIILNRRSCMV AALKIIERNFPELLSLNLQNNKLYKLDGLSDIVEKGPQVKILNLSENELKSIRELDKVKG LKLEELWLQGNPFCSKYADQSAYVSAIQDFFPKLLRLDGQELRPPTVNDIDLRKLVESCK ESYKGSETLKNLILQFLQEYYLIYDYGERQGLLSAYHNEACFSLTIPLNAMDLDTSNLCE YFKYSRNLKTLKEPDLRRQLLKYTKRDIVDCLCVLPKTRHDCDTFVVDMWLQTEKMLCFS VNGVFKEIQGTSQGCVHAFTRTFIATPGSSTRLCIVNDHLFVRDARPDEIQSAFSIPVAT PCSSSTSTLSQEHQRMAHAFSIQSGMKLQWAQK
Download sequence
Identical sequences	ENSCPOP00000002841 10141.ENSCPOP00000002841 ENSCPOP00000002841

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