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Domain assignment for ENSCPOP00000003384 from Cavia porcellus 76_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000003384
Domain Number 1 Region: 35-287
Classification Level Classification E-value
Superfamily SET domain 1.59e-57
Family RuBisCo LSMT catalytic domain 0.00086
Further Details:      
 
Weak hits

Sequence:  ENSCPOP00000003384
Domain Number - Region: 306-396
Classification Level Classification E-value
Superfamily RuBisCo LSMT C-terminal, substrate-binding domain 0.0127
Family RuBisCo LSMT C-terminal, substrate-binding domain 0.022
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000003384   Gene: ENSCPOG00000003747   Transcript: ENSCPOT00000003791
Sequence length 440
Comment pep:known_by_projection scaffold:cavPor3:scaffold_146:43819:66639:1 gene:ENSCPOG00000003747 transcript:ENSCPOT00000003791 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MQKGRGRTSRIRRRKLIRSSESRGVNESHKPEFIKLKKWLKDRNFEDTNLMPARFPGTGR
GLMSKTSLREGQMIISLPGSCLLTTDTVIRSSLGAYIIKWKPPPSPLLALCTFLVSEKHA
GDQSVWKPYLDILPKSYTCPVCLEPEVVNLLPEPLKAKAEEQRMSVQQFFASSRDFFSSL
QPLFEEATDSVFSYSALLWAWCTVNTRAVYLRTRRRDCLSLEPDTCALAPYLDLLNHSPN
VQVKAAFNEETGCYEIRTASDYRKHKEVFICYGPHDNHRLLLEYGFVSLCNPHACVYVSR
EILVKYLPSTDKQMNKKISILKDHGFLENLTFGWDGPSWRLLTALKLLCLEAEKFTYWTK
VLLGEVISDTNEKTSLNIAQKICCYLIEETSAVLQKVSHMKDEKVSLLSQLTLVETLWME
ELKILKASAETLTSLQTTLI
Download sequence
Identical sequences H0V1L3
ENSCPOP00000003384 XP_003462269.1.53824 XP_012997339.1.53824 XP_012997342.1.53824 ENSCPOP00000003384 10141.ENSCPOP00000003384

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