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Domain assignment for ENSCPOP00000004766 from Cavia porcellus 76_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000004766
Domain Number 1 Region: 380-672,777-819
Classification Level Classification E-value
Superfamily FAD/NAD(P)-binding domain 3.24e-73
Family FAD-linked reductases, N-terminal domain 0.00021
Further Details:      
 
Domain Number 2 Region: 653-767
Classification Level Classification E-value
Superfamily FAD-linked reductases, C-terminal domain 4.43e-24
Family L-aminoacid/polyamine oxidase 0.00036
Further Details:      
 
Domain Number 3 Region: 270-376
Classification Level Classification E-value
Superfamily Homeodomain-like 7.44e-20
Family SWIRM domain 0.014
Further Details:      
 
Weak hits

Sequence:  ENSCPOP00000004766
Domain Number - Region: 61-105
Classification Level Classification E-value
Superfamily RING/U-box 0.0247
Family RING finger domain, C3HC4 0.051
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000004766   Gene: ENSCPOG00000005298   Transcript: ENSCPOT00000005355
Sequence length 820
Comment pep:known_by_projection scaffold:cavPor3:scaffold_38:13222942:13276297:1 gene:ENSCPOG00000005298 transcript:ENSCPOT00000005355 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MAAPRGRSKKRTAFDLTPDSLPLRSSGRQAKKKVAETADEDEDGVSEKKYRKCEKAGCTA
TCPVCFASASERCAKNGYTSRWYHLSCGEHFCNECFDHYYRSHKDGYDKYITWKKIWTSN
GKTEPSPKAFMADQQLPYWVQCTKPECRKWRQLTKEIQLTPQIAKTYRCGMKPNTMKPEN
SDHCSMPEDLRVSEVSNHWWYSMLILPPLLKDSVAAPLLSAYYPDCVGMSPSCTSTNRRP
EPSKGPPAVLGGACWCLLSVPGMNRYFQPFYQPNECGKALCVRPDVMELDELYEFPEYSR
DPTMYLALRNLILALWYTNCKEALTPQKCIPHIIVRGLVRIRCVQEVERILYFMTRKGLI
NTGVLTVGADQYLLPKDYHNKSVIIVGAGPAGLAAARQLHNFGIKVTILEAKDRIGGRVW
DDKSFKGVVVGRGPQIVNGCINNPVALMCEQLGISMHKFGERCDLIQEGGRITDPTIDKR
MDFHFNALLDVVSEWRKDKTQLQDVPLGEKIEEIYKAFIKESGIQFSELEGQVLQFHLSN
LEYACGSNLHQVSARSWDHNEFFAQFAGDHTLLTPGYSVIIEKLAEGLDIRLQSPVQSID
YTGDEVQVTTTDGTAYSAQKVLVTVPLAILQKGAIQFNPPLSEKKMKAINSLGAGIIEKI
ALQFPYRFWDSKVQGADFFGHVPPSASQRGLFAVYYDMDPQKQQSVLMSVIAGESVASIR
TLDDKQVLQQCMTTLRELFKEQEVPDPTKYFVTRWSTEPWIQMAYSFVKTFGSGEAYDII
AEEIQGTVFFAGEATNRHFPQTVTGAYLSGVREASKIAAF
Download sequence
Identical sequences 10141.ENSCPOP00000004766 ENSCPOP00000004766 ENSCPOP00000004766

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