SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCPOP00000005242 from Cavia porcellus 76_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCPOP00000005242
Domain Number 1 Region: 2680-2822
Classification Level Classification E-value
Superfamily SET domain 3.27e-48
Family Histone lysine methyltransferases 0.0044
Further Details:      
 
Domain Number 2 Region: 328-398
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.00000000000975
Family PHD domain 0.0092
Further Details:      
 
Domain Number 3 Region: 427-496
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.000000000157
Family PHD domain 0.0097
Further Details:      
 
Domain Number 4 Region: 565-629
Classification Level Classification E-value
Superfamily Bromodomain 0.00000746
Family Bromodomain 0.0055
Further Details:      
 
Weak hits

Sequence:  ENSCPOP00000005242
Domain Number - Region: 289-341
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.00031
Family PHD domain 0.017
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000005242   Gene: ENSCPOG00000005813   Transcript: ENSCPOT00000005875
Sequence length 2825
Comment pep:known_by_projection scaffold:cavPor3:scaffold_19:29554627:29594038:-1 gene:ENSCPOG00000005813 transcript:ENSCPOT00000005875 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
DKSSIAGSEDAEPLAPPIKPIKPVTRNKAPQEPPVKKGRRSRRCGQCPGCQVPEDCGVCT
NCLDKPKFGGRNIKKQCCKLGLCDVVRFGLCLNKCSGHICVSELKSLLSYGIQETFHTYS
AYILPLSYIPNQHLTECPEQEINSCQKPQSREILHYLLQGRTSRRQAVLLDLSRSLVSGP
LMVRARQNCTKGEDCFPVLYRTFVLKTCFPRFVNKVLHYSLQKEKPPPASKPENAGTLNI
LSTLSNGNSSKQKVPTDGVHRIRVDFKEDCEAENVWEMGGLGILTSVPITPRVVCFLCAS
SGHVEFVYCQVCCEPFHRFCLEESERPLEDQLENWCCRRCKFCHVCGRQHQATKQLLECN
KCRNSYHPECLGPNYPTKPTKKKKVWICTKCVRCKSCGSTTPGKGWDAQWSHDFSLCHDC
AKLFAKGNFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAY
TCINCTERHPAEWRLALEKELQLSLKQVLTALLNSRTTSHLLRYRQAAKPPDLNPETEES
IPSRSSPEGPDPPVLTEVSKQDDQQPLDLEGVKRKMDQGNYISVLEFSDDIVKIIQAAIN
SDGGQPEIKKANSMVKSFFIRQMERVFPWFSVKKSRFWEPNKVSSNSGMLPNAVLPPSLD
HNYAQWQEREENSHTEQPPLMKKIIPAPKPKGPGEPDSPTPLHPPTPPILSTDRSREDSP
ELNPPPGIEDNRQCALCLMYGDDSANDAGRLLYIGQNEWTHVNCALWSAEVFEDDDGSLK
NVHMAVIRGKQLRCEFCQKPGATVGCCLTSCTSNYHFMCSRAKNCVFLDDKKVYCQRHRD
LIKGEVVPENGFEVFRRVFVDFEGISLRRKFLNGLEPENIHMMIGSMTIDCLGILNDLSD
CEDKLFPIGYQCSRVYWSTTDARKRCVYTCKIVECRPPVVEPDINSTVEHDENRTIAHSP
SSFTESSSKESQNTAEILSPPSPDRPHLQTSSSCYYHVISKVPRIRTPIYSPTQRSPGCR
PLPSAAGSPTPTTHEIVTVGDPLLSSGLRSIGSRRHSTSSLSPQRSKLRIMSPLRTGNTY
SRHSVSSVSAIGTVTDSESSAKAVDHALGPLNPSANLGHNTPTSSGSQRTVVTVGSKASH
LDVSLEMKHSNASDLLSKSSSLKGEKTKMLSSKSSDGSAHNLAYPGIPKLAPQAHNTTSG
ELSASKISTFAEPSSVPFSSKEALSFPLHLRGQRNDRDQHTDSTQLANPSPDDNAEIKTL
KLSGISNRSSIINEHVGSTSRDRRQKGKKSSKETFKEKHSSKSFLEPGQVTTGEEGNLKP
EFVDEVLTPEFIGQRPCNNVSSDKIGDKVLSISGVPKAPSMQVEGSAKESQASRKRTVKV
TLTPLKMESESQSKNALKESDPVSPLQIESASPAEPVLASESPGDDPVAQPSPNNTSSQD
SQNNNYQNLPVQDRNLMLPDGPKPQEDGSFKRRYPRRSARARSNMFFGLTPLYGVRSYGE
EDIPFYSSSTGKKRGKRSAEGQVDGADDLSTSDEDDLYYYNFTRTVISPGGEERLASHNL
FREEEQCDLPKISQLDGVDDGTESDTSVTATTRKSSQIPKRNAKENGTENLKIDRPEDAG
EKEHIIKSSVVHKNEPKMDNCHSVSRVKAQGQDSLEAQLSSLESSRRVHTSTPSDKNLLD
TYNTELLKSDSDNNNSDDCGNILPSDIMDFVLKNTPSMQALGESPESSSSELLNLGEGLG
LDSNREKDMGLFEVFSQQLPTTEPVDSSVSSSISAEEQFELPLELPSDLSVLTTRSPTVP
SQNASRLAVISDSGEKRVTITEKSVASTEGDPALLSPGVDSTPEGHMTPDHFIQGHMDAD
HISSPPCGSVEQGHGSSQDLTRNSSTPGLQVPVSPTVPIQNQKYVPNSTDSPGPSQISNA
AVQTTPPHLKPATEKLIVVNQNMQPLYVLQTLPNGVTQKIQLSSPVSSAPSVMETNTSVL
GPMGSGLTLTTGLNPSLPTSQSLFPPTSKGLLSMPHHQHLHSFPAATQSSFPPNISSPPS
GLLIGVQSPPDPQLLVSETSPRTDLTTTATPSSGLKKRPISRLHSRKNKKLAPSSTPSNI
APSDVVSNMTLINFTPSQLSNHPSLLDLGSLNASSHRTVPNIIKRSKSGIMYFEQAPLLP
PQSVGGNAATAVSTATISQDTGHPTSGPVSGLASSSSVLNVVSMQTTTAPTSSAAGPGHV
TLTNPRLLGTPDIGSISNLLIKASQQSLGIQDQPVALPPNSGMFPPLGTSQTPSTAAVPA
TSSACVLPSPQAAGMTAASPSGEAEEHYQLQHVNQLLASKPGILSSQLDLDSASGTQASN
FTQPVDAPNSVGLEQNKPLPSTMQASSASPRGSPSPGQQSASCSVPGPAKPKPKIKRIQL
PLDKGNGKKHKVSHLRTSSEAHIPDQEASAAPLSSVTGTPGTEAEQQDTASVGQSSQKEC
GQPAGQVAVLPETQATQNPANEQESTEPKIVEEEESNFSSPLMLWLQQEQKRKESIAEKK
PKKGLVFEISSDDGFQICAESIEDAWKSLTDKVQEARSNARLKQLSFAGVNGLRMLGILH
DAVVFLIEQLSGAKHCRNYKFRFHKPEEANEPPLNPHGSARAEVHLRKSAFDMFNFLASK
HRQPPEYNPNDEEEEEVQLKSARRATSMDLPMPMRFRHLKKTSKEAVGVYRSPIHGRGLF
CKRNIDAGEMVIEYAGNVIRSIQTDKREKYYDSKGIGCYMFRIDDSEVVDATMHGNAARF
INHSCEPNCYSRVINIDGQKHIVIFAMRKIYRGEELTYDYKFPIEDASNKLPCNCGAKKC
RKFLN
Download sequence
Identical sequences ENSCPOP00000005242 10141.ENSCPOP00000005242 ENSCPOP00000005242

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]