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Home > Genomes > Cavia porcellus 76_3 > ENSCPOP00000005526

Domain assignment for ENSCPOP00000005526 from Cavia porcellus 76_3

Domain architecture

Domain assignment details

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Strong hits

Sequence:	ENSCPOP00000005526
Domain Number 1	Region: 369-553
Classification Level	Classification	E-value
Superfamily	NTF2-like	1.72e-65
Family	NTF2-like	0.0000000131
Further Details:

Domain Number 2	Region: 108-199
Classification Level	Classification	E-value
Superfamily	RNA-binding domain, RBD	4.1e-36
Family	Non-canonical RBD domain	0.00000518
Further Details:

Domain Number 3	Region: 203-358
Classification Level	Classification	E-value
Superfamily	L domain-like	7.48e-33
Family	mRNA export factor tap	0.000000156
Further Details:

Domain Number 4	Region: 550-618
Classification Level	Classification	E-value
Superfamily	UBA-like	7.65e-26
Family	TAP-C domain-like	0.0000286
Further Details:

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by

Molecular Function
Biological Process
Cellular Component

Biological Process	IC (bits)	H-Score

Cellular Component	IC (bits)	H-Score

Molecular Function	IC (bits)	H-Score

Protein sequence

External link(s)	Protein: ENSCPOP00000005526 Gene: ENSCPOG00000006126 Transcript: ENSCPOT00000006190
Sequence length	618
Comment	pep:known_by_projection scaffold:cavPor3:scaffold_44:15013650:15023608:1 gene:ENSCPOG00000006126 transcript:ENSCPOT00000006190 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	MADEGKSYNEHDDRVSFPQRRKKGRGPFRWKYGDGNRRSGRGSSSVRSPRLEENDGDVAM SETQDGPRVRYNPYSSRPNRRGDAWHDRDRIHVTVRRDRAPPERGGAGTSQDGTSKNWFK ITIPYGRKYEKSWLLSMIQSKCSVPFTPVEFHYENTRAQFFVEDASTASALKAVNYKIVD RENRRISIIINSSAPPHTVQNELKPEQVEQLKLVMSKRYDGSQQALDLKGLRSDPDLVAQ NIDVVLNRRSCMAATLRIIEENIPELLSLNLSNNRLYKLDDMSSIVQKAPNLKILNLSGN ELKSERELDKIKGLKLEELWLDGNTLCDTFRDQSTYISAIRERFPKLLRLDGHELPPPIA FDVEAPTVLPPCKGSYFGTENLKSLVLHFLQQYYAIYDSGDRQGLLDAYHDGACCSLSIP FIPQNPARSNLAEYFKDSRNVKKLKDPTLRFRLLKHTRLNVVAFLNELPKTQHDVNSFVV DISAQTSTLLCFSVNGVFKEVDGKSRDSLRAFTRTFIAVPASNSGLCIVNDELFVRNASP EEIQRAFAMPAPTPSSSPVPTLSPEQQEMLQTFSTQSGMNLEWSQKCLQDNNWDYTRSAQ AFTHLKAKGEIPEVAFMK
Download sequence
Identical sequences	H0V731 XP_003467959.1.53824 ENSCPOP00000005526 10141.ENSCPOP00000005526 ENSCPOP00000005526

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