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Domain assignment for ENSCPOP00000006322 from Cavia porcellus 76_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000006322
Domain Number 1 Region: 29-136
Classification Level Classification E-value
Superfamily SRCR-like 1.31e-39
Family Scavenger receptor cysteine-rich (SRCR) domain 0.00015
Further Details:      
 
Domain Number 2 Region: 311-412
Classification Level Classification E-value
Superfamily SRCR-like 1.44e-34
Family Scavenger receptor cysteine-rich (SRCR) domain 0.00017
Further Details:      
 
Domain Number 3 Region: 421-538
Classification Level Classification E-value
Superfamily SRCR-like 3.53e-26
Family Scavenger receptor cysteine-rich (SRCR) domain 0.0007
Further Details:      
 
Domain Number 4 Region: 172-294
Classification Level Classification E-value
Superfamily SRCR-like 1.09e-22
Family Scavenger receptor cysteine-rich (SRCR) domain 0.0057
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000006322   Gene: ENSCPOG00000007010   Transcript: ENSCPOT00000007079
Sequence length 757
Comment pep:known_by_projection scaffold:cavPor3:scaffold_1:31834616:31848164:-1 gene:ENSCPOG00000007010 transcript:ENSCPOT00000007079 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MTWSPPATLFLFLLLLGQAPLHSSQAPGTKKLRLVGPASRPEEGRLEVLHQGQWGTVCDD
DFTLQEATVACRQLGFESALTWAHSAKYGQGEGPIWLDNVRCLGTESTLDQCKSNGWGVS
DCSHSEDVGVVCHPQRQRGFLSERVSNALGPLGRRLEEVRLKPVLASAKRHSPVIEGVVE
VRYEGHWRQVCDQGWTMNNSRVVCGMLGFPSQVPVNSYYYSHRKVWNLKMKDPKSRLKNL
VNKNSFWIHRVNCLGTEPHLANCQVQVAPGQGKLRPACPGGMHAVVSCVPGPRFYSPKGK
PQHKEPRAVELKLRLRSGAQVGEGRVEVLVNRQWGTICDHRWNLISASVVCRQLGFGSAR
EALFGAQLGQGLGPIHLSEVHCRGYEQTFSDCLALERPQHGCQHENDAAVRCNIPDMGFQ
NQVRLAGGRSREEGVVEVQVEVNGVRRWGTVCSDHWELSEAMVVCRQLGLGFANFAIKDT
WYWQGTPEAGEVVMSGVHCSGTELALQQCQRHGPVHCSHGTGRFSAGVSCTNSAPDLVMN
AQLVQETAYLEDRPLSLLYCAHEEKCLSQSADHMDWPYGHRRLLRFSSQIYNLGRADFRP
KTGRHSWIWHQCHRHYHSIEVFTHYDLLTLNGSKVAQGHKASFCLEDTNCPTGLQRRYAC
ANFGEQGVTVGCWDTYRHDIDCQWVDITDVSPGDYIFQVVVNPTNDVAESDFSNNMMRCR
CKYDGQRVWLHNCHTGDSYRANAEFFLEQERLRNNLI
Download sequence
Identical sequences ENSCPOP00000006322 ENSCPOP00000006322 10141.ENSCPOP00000006322

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