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Domain assignment for ENSCPOP00000007324 from Cavia porcellus 76_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000007324
Domain Number 1 Region: 78-223
Classification Level Classification E-value
Superfamily Pentapeptide repeat-like 0.000000000000147
Family Pentapeptide repeats 0.012
Further Details:      
 
Domain Number 2 Region: 415-519
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.0000000134
Family Canonical RBD 0.0043
Further Details:      
 
Domain Number 3 Region: 635-732
Classification Level Classification E-value
Superfamily RNA-binding domain, RBD 0.000000727
Family Canonical RBD 0.015
Further Details:      
 
Weak hits

Sequence:  ENSCPOP00000007324
Domain Number - Region: 934-976
Classification Level Classification E-value
Superfamily beta-beta-alpha zinc fingers 0.0327
Family Classic zinc finger, C2H2 0.04
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000007324   Gene: ENSCPOG00000008146   Transcript: ENSCPOT00000008221
Sequence length 1109
Comment pep:known_by_projection scaffold:cavPor3:scaffold_8:25028655:25113026:1 gene:ENSCPOG00000008146 transcript:ENSCPOT00000008221 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
YSGSQEERFAPGWNRDYPPPPLKSHAQERHSGNFPGRDSLPFDFQGHSGPPFANVEERSF
SYGARDGPHSDYRGGEGPGHDFRGGDFSSSDFQSRDSSQLDFRGRDIHSGDFRDREGPPM
DYRGGDGTSVDFRGREIPHMNYRERDTHTVDFRGRDPPSDFRGRGTYDLDFRGRDGSHAD
FRGRDLSDLDFRTRDQSRSDFRNRDISDLDFRDKDGTQVDYRGRGSGTTELDFRDRDTPH
SDFRGRHRSRTDQDFRGREMGPCMEFKDREMPPVDPKLLDYIQPSTQDREHSCMSVNKGE
ESKHDHTIERPTFGIQKGEFEHSETREGETQGVAFEHEPPSDFQKSQSPIKDQDKSQLCG
TEQQSSDADLFKEKGDLDFLGQQDTDYRSMEYRDVDHRLPGSQVFDYGQTKSFPEGKTAR
DTQRDLQDQDYRTGPSEEKPSRLIRLSGVPENATKEEILNAFRIASGMPVKELQLKEYNT
GYDYGYVCVEFSLLEDAIGCMEANQGTVMIHDKEVTLEYVPNLDFWYCKRCKTSTGGHRS
SCSFCKCPKEVTEAKQELITYPQPQKTSIPASLEKQPNQSPRPADKESESRKQEEGQESR
LGHQKREAERYLPHSRREGLAFRRDREKESWSGETRQDGESKTIMLKRIYRSTPPEVIVE
VLEPYVRLTTANVRIIKNRTGPMGHTYGFIDLDSHAEALRVVKILQNLDPPFSIDGKMVA
VNLATGKRRNDSGDHSDHMHYYQGKKYFRDRRGGGRSSDWSSDTHRQGQQSSSDCYIYDS
ATGYYYDPLAGTYYDPNTQQEVYVPQDPGSPEEEEIKEKKPTSQGKSSSKKEIPKRDSKE
KKDRTVTKFQEDASEGKTPPEDVFKKPLPPTVKKEESPPPPKVVNPLIGLLGEYGGDSDY
EEEEEEEQAAPLHPRTAQPQQREELTKKENEEDKLTDWNKLACLLCRRQFPNKEVLIKHQ
QLSDLHKQNLEIHRKIKQSEQELAYLERREREGRFKERGNDRKEKLQSFDSPERKRIKYS
RETDSDRKPVDKEDINTSNKGGYVQQPTGWKKGAGLGYAHPGLGSSEETEGRMKGPGVGV
PGRTSKRQSNETYRDAVRRVMFARYKELD
Download sequence
Identical sequences ENSCPOP00000007324 10141.ENSCPOP00000007324 ENSCPOP00000007324

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