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  Home > Genomes > Cavia porcellus 76_3 > ENSCPOP00000011900

Domain assignment for ENSCPOP00000011900 from Cavia porcellus 76_3

Domain architecture

Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000011900
Domain Number 1 Region: 4764-4977
Classification Level Classification E-value
Superfamily GFP-like 1.26e-57
Family Domain G2 of nidogen-1 0.0017
Further Details:      
 
Domain Number 2 Region: 3180-3282
Classification Level Classification E-value
Superfamily Immunoglobulin 7.34e-23
Family I set domains 0.039
Further Details:      
 
Domain Number 3 Region: 1028-1120
Classification Level Classification E-value
Superfamily Immunoglobulin 1.08e-22
Family I set domains 0.0076
Further Details:      
 
Domain Number 4 Region: 2901-2999
Classification Level Classification E-value
Superfamily Immunoglobulin 1.12e-22
Family I set domains 0.011
Further Details:      
 
Domain Number 5 Region: 2421-2505
Classification Level Classification E-value
Superfamily Immunoglobulin 1.99e-22
Family I set domains 0.01
Further Details:      
 
Domain Number 6 Region: 1850-1948
Classification Level Classification E-value
Superfamily Immunoglobulin 2.1e-22
Family I set domains 0.0079
Further Details:      
 
Domain Number 7 Region: 4075-4174
Classification Level Classification E-value
Superfamily Immunoglobulin 2.64e-22
Family I set domains 0.0094
Further Details:      
 
Domain Number 8 Region: 1480-1576
Classification Level Classification E-value
Superfamily Immunoglobulin 2.65e-22
Family I set domains 0.024
Further Details:      
 
Domain Number 9 Region: 4347-4434
Classification Level Classification E-value
Superfamily Immunoglobulin 3.75e-22
Family I set domains 0.01
Further Details:      
 
Domain Number 10 Region: 2613-2699
Classification Level Classification E-value
Superfamily Immunoglobulin 4.61e-22
Family I set domains 0.011
Further Details:      
 
Domain Number 11 Region: 2515-2601
Classification Level Classification E-value
Superfamily Immunoglobulin 7.13e-22
Family I set domains 0.016
Further Details:      
 
Domain Number 12 Region: 3645-3739
Classification Level Classification E-value
Superfamily Immunoglobulin 3.05e-21
Family I set domains 0.0078
Further Details:      
 
Domain Number 13 Region: 2820-2908
Classification Level Classification E-value
Superfamily Immunoglobulin 6.73e-21
Family I set domains 0.0047
Further Details:      
 
Domain Number 14 Region: 474-568
Classification Level Classification E-value
Superfamily Immunoglobulin 7.32e-21
Family I set domains 0.061
Further Details:      
 
Domain Number 15 Region: 1292-1389
Classification Level Classification E-value
Superfamily Immunoglobulin 1.11e-20
Family I set domains 0.011
Further Details:      
 
Domain Number 16 Region: 566-658
Classification Level Classification E-value
Superfamily Immunoglobulin 3.88e-20
Family I set domains 0.017
Further Details:      
 
Domain Number 17 Region: 2312-2412
Classification Level Classification E-value
Superfamily Immunoglobulin 4.53e-20
Family I set domains 0.0066
Further Details:      
 
Domain Number 18 Region: 2231-2318
Classification Level Classification E-value
Superfamily Immunoglobulin 5.33e-20
Family I set domains 0.0088
Further Details:      
 
Domain Number 19 Region: 3007-3094
Classification Level Classification E-value
Superfamily Immunoglobulin 5.87e-20
Family I set domains 0.008
Further Details:      
 
Domain Number 20 Region: 3297-3377
Classification Level Classification E-value
Superfamily Immunoglobulin 6.31e-20
Family I set domains 0.03
Further Details:      
 
Domain Number 21 Region: 1386-1484
Classification Level Classification E-value
Superfamily Immunoglobulin 1.11e-19
Family I set domains 0.013
Further Details:      
 
Domain Number 22 Region: 923-1019
Classification Level Classification E-value
Superfamily Immunoglobulin 1.39e-19
Family I set domains 0.01
Further Details:      
 
Domain Number 23 Region: 2035-2132
Classification Level Classification E-value
Superfamily Immunoglobulin 1.8e-19
Family I set domains 0.019
Further Details:      
 
Domain Number 24 Region: 1939-2037
Classification Level Classification E-value
Superfamily Immunoglobulin 2.33e-19
Family I set domains 0.029
Further Details:      
 
Domain Number 25 Region: 832-926
Classification Level Classification E-value
Superfamily Immunoglobulin 2.34e-19
Family I set domains 0.014
Further Details:      
 
Domain Number 26 Region: 3920-3965,4020-4079
Classification Level Classification E-value
Superfamily Immunoglobulin 3.8e-19
Family I set domains 0.041
Further Details:      
 
Domain Number 27 Region: 734-829
Classification Level Classification E-value
Superfamily Immunoglobulin 4.02e-19
Family I set domains 0.018
Further Details:      
 
Domain Number 28 Region: 3087-3186
Classification Level Classification E-value
Superfamily Immunoglobulin 4.18e-19
Family I set domains 0.016
Further Details:      
 
Domain Number 29 Region: 3376-3467
Classification Level Classification E-value
Superfamily Immunoglobulin 6.65e-19
Family I set domains 0.01
Further Details:      
 
Domain Number 30 Region: 4160-4259
Classification Level Classification E-value
Superfamily Immunoglobulin 7.71e-19
Family I set domains 0.018
Further Details:      
 
Domain Number 31 Region: 4255-4348
Classification Level Classification E-value
Superfamily Immunoglobulin 1.73e-18
Family I set domains 0.0082
Further Details:      
 
Domain Number 32 Region: 2726-2813
Classification Level Classification E-value
Superfamily Immunoglobulin 4.11e-18
Family I set domains 0.018
Further Details:      
 
Domain Number 33 Region: 655-740
Classification Level Classification E-value
Superfamily Immunoglobulin 9.76e-18
Family I set domains 0.014
Further Details:      
 
Domain Number 34 Region: 3732-3831
Classification Level Classification E-value
Superfamily Immunoglobulin 1.54e-17
Family I set domains 0.0088
Further Details:      
 
Domain Number 35 Region: 1662-1760
Classification Level Classification E-value
Superfamily Immunoglobulin 1.56e-17
Family I set domains 0.015
Further Details:      
 
Domain Number 36 Region: 3827-3921
Classification Level Classification E-value
Superfamily Immunoglobulin 3.01e-17
Family I set domains 0.023
Further Details:      
 
Domain Number 37 Region: 3558-3651
Classification Level Classification E-value
Superfamily Immunoglobulin 4.86e-17
Family I set domains 0.086
Further Details:      
 
Domain Number 38 Region: 2123-2220
Classification Level Classification E-value
Superfamily Immunoglobulin 7.76e-17
Family I set domains 0.015
Further Details:      
 
Domain Number 39 Region: 1570-1670
Classification Level Classification E-value
Superfamily Immunoglobulin 4.17e-16
Family I set domains 0.015
Further Details:      
 
Domain Number 40 Region: 1110-1201
Classification Level Classification E-value
Superfamily Immunoglobulin 8.24e-16
Family I set domains 0.02
Further Details:      
 
Domain Number 41 Region: 1767-1852
Classification Level Classification E-value
Superfamily Immunoglobulin 0.00000000000000252
Family I set domains 0.0093
Further Details:      
 
Domain Number 42 Region: 5-172
Classification Level Classification E-value
Superfamily vWA-like 0.00000000000000587
Family Integrin A (or I) domain 0.021
Further Details:      
 
Domain Number 43 Region: 3464-3554
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000000000144
Family I set domains 0.0081
Further Details:      
 
Domain Number 44 Region: 1195-1278
Classification Level Classification E-value
Superfamily Immunoglobulin 0.000000000000016
Family I set domains 0.022
Further Details:      
 
Domain Number 45 Region: 5165-5244,5296-5384
Classification Level Classification E-value
Superfamily Growth factor receptor domain 0.00000000000105
Family Growth factor receptor domain 0.0089
Further Details:      
 
Domain Number 46 Region: 4997-5053
Classification Level Classification E-value
Superfamily EGF/Laminin 0.0000000000446
Family EGF-type module 0.0083
Further Details:      
 
Domain Number 47 Region: 392-480
Classification Level Classification E-value
Superfamily Immunoglobulin 0.0000000001
Family I set domains 0.039
Further Details:      
 
Domain Number 48 Region: 5038-5085
Classification Level Classification E-value
Superfamily EGF/Laminin 0.00000264
Family EGF-type module 0.0065
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000011900   Gene: ENSCPOG00000013220   Transcript: ENSCPOT00000013347
Sequence length 5507
Comment pep:known_by_projection scaffold:cavPor3:scaffold_27:2582421:2698612:-1 gene:ENSCPOG00000013220 transcript:ENSCPOT00000013347 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence 
PKGGATLAFVFDVTGSMWDDLMQVMDGAARILERTLSRSQAVANYALVPFHDPDIGPVTL
TADPVVFQKELRDLYVQGGGDCPEMSVGAIKAAVEVANPGSFIYVFSDARAKDHHRKKQS
QVVFVLTGDCGDRAHPGYLAYEEIASTSSGQVFHLDKQQVAEVLKWVESAVQASKVHLLS
TDHEAGGEHTWRLPLDPSLKEVTISLSGPGPEIEVRDPLGRILQKDEGLKVLLSIPDSAK
VVAFKPKHPGLWSIKVYSSSRHSVRITGISDIDFRAGFSTQPSLDLNHTIEWPLEGVPIS
LVINSTGLQAPGSLDSVELSHSSGRPLLTLPMQPLSNWSAPQLWAGPPFHAPRERFYLKV
RGKDPEGNALLRVSGVSYSGVTPGAPLVSMAPRIHGHRNQPLLVSCSVHSALPFRLQLYR
SGVRLGEERHFLESGNSSWEIPRASKTDEGTYECTAVSKAGTGRARAQVIITDPPPQLVP
TPNVTVSPGETAVLSCQVLGDAPYNLTWVRDWRVLPASMGRITQLANLSLEIRGVVPSDS
GRYQCMASNANGATRASTWLLVREVPQVSIDTRAQSFSQGVEVKVSCSASGYPTPHLSWS
REGLPLQEDSRTRVDPQGTLIIQRVAPEDAGNYTCRAANEVGADEETVTLYYADPPSVSA
VNSVVLAAVGQEAVLGCMATGAPPPRVVWYRGDLEMILAPEDSSLGVLRVPSAQERDAGV
YTCRAINELGTASAEVQLEVGHAPRLTELPRDIAVELGRSAFLACRATGRPPPTVTWHRR
DGLPLGLRQRDSGVLLIESVAPEDQATYVCEAQNVFGKAQAETRLSVTGHAPPQIAGSAS
IVRVLEGQPVSLPCVILAGRPLPERRWLKATHPLPAGGRGSVRADGSLHFDRALQEDSGT
YSCMVSNVAGSQHRDVELVVQEVPPRIHPIATHHVTNEGVPASLPCAASGVPTPTISWTK
ESKALASGGPHYNVSKGGTLVITRPSPQDTGAYVCTATNAVGFSSQEMRLSVNTKPRIRV
NGLQDTDSPLHVTAKTGKEVTLDCEAQGSPPPLVTWTKNAQPLLPGTDSHVLLPSGSLRL
TRAQASDDGHYECTASNPAGSASRRYILRVQVPPQVQPGPHVLKALLGEALDLNCMAQGR
PEPQLLWSKDGAALPRAGPAGSVHFEAVQISDAGMYRCEATSSAGTDAWELELRVLEPPH
WLANNSSLVERVAGENASLPCPARGTPMPQVTWRKGPSLEPLSGRPGVVLDDGSLFLSLA
SLTDGGDYECQATNEVGLRVQEDQAAGLRPPVSPSIREDGRQGNVSAVAGQPLSLECDAS
GSPAPEILWLKDGQLIPEAGGHRLLNGARTLHFPRLEEADSGLYSCRAENQAGKAQRDFS
LLVLVPPSMLGVGATQEVLGLAGADVELECRTSGVPTPQVEWTKDGQPVLPGDPRVQLRE
DGQVLRITGSHPGDAGRYQCTAFSPAGQQAKDFQLRVHSPPTIWGSNETGEVAAMEGHAV
RLLCEARGTPAPDVTWFKDGVLLPTSPEVVYTRSGRQLQLSRAQSSDAGVYTCKASNPVG
VTEKATRLAVYVAPTIEGASGGPYMVQAVAGRPLALECAARGFPPPAVSWQHEGLPLAES
NGTWLEPDGALRLQSPGEASGGLYSCVASSPAGEAVLQYAVDVQVPPTAPGGAQAQVAAI
VGQPLELPCRASGSPAPTIQWLQNGRPAEELAGVRVASQGTTLHIDHVELAHAGLFACQA
TNDVGTTGAEVEVSVHELPSVDIIGGENLTVPFLQSVTLQCVGVGMPPPSLHWWKDGVAL
ATSGGTLQVAGASAVEQIEKVDLRDEGIYTCTATNLAGESKKDVAVKVLVPPNIEPGPIN
QAVLENTSITLECLASGVPPPDVSWFKGRQPVSARTGLTVSKDGRSLRIEQAQLSDAGSY
RCVASNVAGSTELQYGLRVHVAPQITLAPSLPGPVLLGAPVRLSCNASGVPSPTLMWLKD
GNPVSPAGTPGLQVFPGGRVLALASARTSDSGSYSCVAVSAVGEDRRDVTLQVHVPPSIL
GEELTISVVANESVTLECRSHAVPPPKLSWQKDSRPLKLRPGIHLSQDKALLEVSRAEVG
DAGRYTCEALNRAGRSEKHFDVNVWVPPAFPLREPRPLAVTEGQLARLSCECRGVPFPKV
TWSKDGQLLPGEAPGGEQVSVVGRLLYLGPSRPAQEGTYTCECSNVAGNSSQAQRLEVHG
EQSPKARRPGPTRVSVLQGGEAALDCNATGRPPPAVTWERDGQPLRTEPGLQLQSQGHRL
RVQQAQAAHAGRYSCVAKNAVGLAERRFELSVLVPPVLLGSADPVTNVTAAVHGPLTLLC
EATGVPPPEVRWFREEQPIQPREDTYLLAGGWMLRVSQAQEQDRGLYACLASNEAGEARR
NFSVEVLVPPTIENEGLEEVTRVPEGQTAQLTCNTTGHPQPIITWFKDGRPLGGGDAHHT
SPDGAHLWVPQANLSHAGHYSCIASNVVGEKTKHFQLSVLVLPTILGATEDGAGEEVTVT
INNPISLICEALAFPAPNITWMKDGVPFEASRNIQMLPGTRGLQILNAQKEDAGQYTCVV
TNELGEATKSYHVEVLIPPSISKDDPAEDLGVKEVKTKVNSTLSLECECWGSPPPAISWY
KDGQPVTPGQRLRIMGEGRLLQIQPTQVSDSGRYLCVATNVAGEDDQDFTVLIQVPPMFQ
RVGHPSTAFESLSREEEARGEVTEYREVVENNPAYLYCDTNAIPPPELTWYREGRPLSTS
ADHRASVLQGGRVLQLPLVRAEDAGRYSCKASNEVGEDWLHYDLLVLTPPVILGDTEELV
EEVTVNASSTVSLQCPALGNPAPTLSWLQNGLPFSPSPRLQVLEDGRVLQVSTAEVADAA
SYMCVAENLAGSVEKLFTLRVQVPPWITGQNLERVSAVLNSSVSLPCEALAHPSPEVTWY
KDDEALVLGEEVFLLPGTHTLQLPRVQPSDSGTYLCEALNAAGRDQKAVQLSVLVPPTFR
QAPDSHQEVIFVRAGDKAILNCETDSFPEPVVTWYKDQQPLALGPWAQAPQDAQRLEIPA
SQVSDKGSYSCKVSNAAGEATRTFVLTVQVPPTFENPKTETVSQVAGRALVLTCDVSGVP
APTVTWLKDRMPVESSVVHGVVSRGGRLQLSRLQPTQAGTYTCVAENAQAEARKDFVVAV
LEAPRIRSSDAPQEHSVLQGQEVRLDCEVQGQPPPDVAWLKDGAPLQQDVGPHLRFFLDS
SSLVLKGLRASDSGAYTCVARNTAGEDARLHTVTVLATPVPPTIEQEAGGTGILLSRPGE
LVTMACPVRGSPPIHLSWLKDGLPLPLSQRTQLHGSGRTLRLSQVQLADAGTFTCVAVSL
AGVASRNFTLQVLVPPILEPADFQGEVVVAPGSSVVLPCEAQGSPLPLLSWMKDGEPLLP
QSLEQGPGLQLERVGAGDSGTYSCVATSEAGEAMRHFRLTVMDPPHIQDSEQPVERLLVA
GAHMELLCDARGVPQPNITWHKDGQALRGQAGRVFRVEGVQVVGDAGLYTCLAESPAGEA
EKSFRVRVQAPPNVVGPQGPRSVVGLAPGQLVLECPVEAEPAPEIEWHRDGVLLQVDTHT
QLPKHGRFLQLQALSTADSGHYSCTARNQAGSTSVAFHVEIHMVPTIQPGPHAVNASVNQ
IALLPCRASGEPPPVVSWRKDGAPLDPESPRLEVLPDGSLRIQPVLTQDAGHYVCLASNS
AGSDRQGRDLQVFEPPAISPGPSNLTLTAPSPAVLPCEASGSPKPLVAWWKDGQKLDFHT
QQGAYRLLPSNALLLMAPSAQDSAQFECVVSNEVGQARKLYQVTVHEPPTIADDQTAFTV
TRMAPVVLTCHSTGVPVPTVSWSKAGAQLGARGSGYRVSSSGALEIGQVLPIHAGRYTCT
ARNVAGVAHKHVVLTVQASPVVKPLPSVVQVVAEEEVLLPCEASGIPRPTVTWQKEGFSV
PSGGPGTHLPRSPLWLSCLPRSPCRPLRGPPGPGTQSSPLSRQPEIPFMWCPSWGPRSPT
ATDFRPSHPGGRSQVLPSGQLRLTRAHPEDAGNYFCMAQNSAGSAMGRTRLVVQVPPVIE
SSLPDLSATEGSHALLPCVARGSPEPDIHWEKDGQPVSVSGAQGKYSLQPSGELLVKNSE
GQDAGTYTCTAENVVGRARRRVHLTILALPIFTTLPGDRSLRLGDRLWLRCVARGSPTPS
LSWTVNDLPVTEGVSEQDGGSTLQRAAVTRKDSGTYVCWAENRVGRVQAVSFVHVKEAPV
LQGEPFSRLVEPVGGSIQLDCLVRGDPAPNIRWTKDGLPLWDSRLRIQNGSLTIHRTKMA
DAGQYQCLAENEVGAVKKVVTLVLQSAPVLQVEPQDVTVRPGEDVALRCRATGEPAPTIE
WLRAGQPLRASRRLRTLLDGSLELEHVEAGDAGEYQCVAHNLLGSATARAFLVLRGLFAI
RNRQGPLAVPGYFTTCEVVSIKQEHPWCLLGERLVPAQASHMGCAAVLRNHKKIICTCTK
ETQSSISGWAVPCSKQSTVTALCPSVVPGKRPITLPSRSMADIANQSPRTVSESFSTAPF
PGRGTLLSGLRGVCEVLPPAPGGWPLSLITGIVSVCLSRNFPFLDQTVAPTLVWWPECVY
RIGPGPDSRGTRSCRHTRVGDMRGGCPPLSAEVLSFPELPGHGSCSRFMVCGSSSFLPLI
RRPRLPPVPHSTPAADPSGPQASPGHCQEATTPQPGQLWGARPSWSQISPLVAAPPHTLP
SLFLLKVGVASQCYCCPFCVLTEQPRGSRGSMVGVINGQEFGVAALNTSVQQEALSGVTT
IRSSVSPIPAGVGPLMRVLVVTVAPIYWALAGEREEALNGYSLTGGSFRQESHVEFATGE
LLRMTQVARGLDPDGLLLLDVVVSGTVPEALEGGDLQVQDFEERYVQTGPGRLFVGTMQG
FLHDNIPGLLRCNHSIQYAAARGPQPQLVQHLQASAVSSAFDPEAQALRFQLAAALQAEE
HEAGCPEGFEPDPRGEFCVDRDECTDGPSPCSHSCHNVPGRFSCSCPAGFTLTWDDRTCR
DVDECEWDTHLCQEGQRCVNLLGSYRCLPDCGPGFRVAAGGASCEGGRSTGAQETPAHHR
GQSCGSSAFVLLMTRGCASPSDSLRSPLSPAALAAALDQGTRPCGVSPREALAEPHPDPP
DVDECLEQRDQCLYNQLCENTAGGHHCSCPRGYRTQGPGLPCLDVNECQQLPEPCGYQCH
NLQGSYRCLCPAGYTLLRDGKACTPLERKGQNVTTVSHRRPSMPWLRPRAPIPGGSYHAW
VSLRPGPGALSSVSRAWCPPGFIWQNGACVDLDECRVRSLCQHACQNTEGSYHCLCPAGY
RLLPSGKNCQDINECEEDAVECGPGQMCFNTRGGFQCVDTPCPEAYRQGTNPGTCFRRCS
QDCDAEGPATLQYRLLPLPLGVRAHHDVARLAAFSEPGVPANQTELRVLQPDPRSPFALR
PLRAGLGAVYTRRTLTRAGLYRLTVRAAAPRHQSVYVLLIAVSPYPY
Download sequence
Identical sequences ENSCPOP00000011900 10141.ENSCPOP00000011900 ENSCPOP00000011900

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]
Please cite: Gough, J., Karplus, K., Hughey, R. and Chothia, C. (2001). "Assignment of Homology to Genome Sequences using a Library of Hidden Markov Models that Represent all Proteins of Known Structure." J. Mol. Biol., 313(4), 903-919.

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© Copyright 2013 The SUPERFAMILY authors and Julian Gough.