SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCPOP00000012619 from Cavia porcellus 76_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCPOP00000012619
Domain Number 1 Region: 4-138
Classification Level Classification E-value
Superfamily vWA-like 0.00000165
Family Integrin A (or I) domain 0.066
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000012619   Gene: ENSCPOG00000014008   Transcript: ENSCPOT00000014150
Sequence length 903
Comment pep:known_by_projection scaffold:cavPor3:scaffold_79:6361864:6416200:-1 gene:ENSCPOG00000014008 transcript:ENSCPOT00000014150 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPILLFLIDTSASMNQRTDLGTSYLDIAKGLWSLFLKVKRAGDPASPGDRDMLVYLLPNP
PYCIQAGWKENHATFMSELKNLQASGLTTLGQALRSSFDLLNLNRLISGIDNYGQGRNPF
FLEPSILITITDGNKLTSTASVQEELHLPLNSPLPGSELTKEPFRWDQRLFALVLRLPGV
ACTEPEQLGSVPTDESAITQMCEVTGGIGRSYCVRTQRMLNQCLESLVQKVQSGVVINFE
KTGPDPLPVGEDGLMDSSRPSNSFAAQPWHSCHKLIYVRPNSKTGVPVGHWPIPESFWPD
QNLPSLPPRTSHPVVRFSCIDCEPMVIDKLPFDKYELEPSPLTQYILERKSPHTCWQVFV
TSSGKYNELGYPFGYLKASTTLTCVNLFVMPYNYPVLLPLLDDLFKVHKLKPNLKWRQAF
DSYLKTLPPYYLLPLKKALRMMGAPNLISDNLDCGLSYSVISYLKKLSQQTKLESERILA
SVGKKPPQEIGIKVKNHSGGNMSLAHNKNFRKLLKEITGETALRLTELNTKEFAGFQVGL
LNKNLKPQTYRNAYDIPRRDLLDQLTRMRSNLLKTHKFIVGQDEDSLHSVPVAQMGNYQE
YLKTLASPLREIDPDQPKRLHTFGNPFKQDKKGMMIDEADEFVTGPQNKLKRPGETSPMS
AKRRRSMSLLLRKPPTLPTVTNHVGEKGSLPASWFSSYPNLKPTLVHSEKERTNGAVIHD
VHEEKMENGQTPPDGFLSKSTPVEVLNVTGDGLPSNQLDSLSDDFASLRKDGLIHKPGNN
VLVGGAPNCSLSVDDQNITVPSTLETILPNTLQITPAMAHGINADIKHQLMKEVRKFGRK
YERIFILLEEVQGPLEMKKQFVEFTIKEAARFKRRVLIQYLEKVLEEIDSHYLLNNVNHI
NSR
Download sequence
Identical sequences ENSCPOP00000012619 ENSCPOP00000012619 10141.ENSCPOP00000012619

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]