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Domain assignment for ENSCPOP00000012867 from Cavia porcellus 76_3

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Strong hits

Sequence:	ENSCPOP00000012867
Domain Number 1	Region: 404-578
Classification Level	Classification	E-value
Superfamily	PAP/OAS1 substrate-binding domain	3.01e-33
Family	RNA editing terminal uridyl transferase 2, RET2, domain 2	0.046
Further Details:

Domain Number 2	Region: 161-230,337-400
Classification Level	Classification	E-value
Superfamily	Nucleotidyltransferase	1.57e-28
Family	Catalytic subunit of bi-partite nucleotidyltransferase	0.081
Further Details:

Domain Number 3	Region: 54-127
Classification Level	Classification	E-value
Superfamily	RNA-binding domain, RBD	0.0000000000000163
Family	Canonical RBD	0.0051
Further Details:

Domain Number 4	Region: 4-46
Classification Level	Classification	E-value
Superfamily	beta-beta-alpha zinc fingers	0.0000146
Family	Classic zinc finger, C2H2	0.063
Further Details:

Weak hits

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by

Molecular Function	IC (bits)	H-Score

Biological Process	IC (bits)	H-Score

Cellular Component	IC (bits)	H-Score

External link(s)	Protein: ENSCPOP00000012867 Gene: ENSCPOG00000014281 Transcript: ENSCPOT00000014423
Sequence length	851
Comment	pep:novel scaffold:cavPor3:scaffold_44:15151278:15160727:1 gene:ENSCPOG00000014281 transcript:ENSCPOT00000014423 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence	MEAVDSDVESLPRGGFRCCLCQVTTANRPSLDAHLGGRKHRHLVELRAARKAQGLRSVFV SGFPRNVDSTELSEYFQAFGPVASVVMDKDKGVFAIVEMGDVASRDAALAQPQHSLRGQR LRVRPREQKAFQSPVSRGPQGVAPDDSDQLLSTLAEAPDVGGQMLKLVALRELSEAERQL RRLVVALMQEVFTEFFPGCVVHPFGSSTNSFDVHGCDLDLFLDLGELEEPQPVLKAPESP SLDSALASPLDPQACTPASSVDLQSPASPHDSEVLDFETLSSSRAPQTPDSALASETLAS PQSLPPASPLQEDRGEEDLGKGPSLAEAPGHEKPVGAAVLELVGSILRRCVPGVYRVHSV PSARRPVVKFCHRPSGLHGDISLGNRLALHNSRFLSLCSELDGRVRPLVYTVRCWAQGRG LTGSGPLLSNYALTLLVIYFLQTRDPPVLPTVAQLTQKAGEEEQVEVDGWDCSFPRDTSN LESSTNVEPLGSLLAQFFSCVSCWNLRGSLLSLREGQALLVAGGQLADLWEGLRLGPMNL QDPFDLSHNVAANVTSCVAARLQNCCRAAASYCRSLQYQRRSARGRDWGLLPLLQPCSPA SLLAATPILLPTVPFPQLAAALVQVLRDALGCQIEQGTKRQRPGAGMEEAAQGGAVKRPK LDGHREGGKDGAGAEDPWGDTRDLGRGAEEEMVVEAGEAAQDWGMWSPGQSGDLPVVAGQ CPSPGEGTSHSGPTRPCQGHASWRCALWYRTWQGRRRVRRRLQQQWRQGQGDDTGTEWLA VEARVTQELARPGSGGEQAARAEPLVTFVASLSEAEGTLTVTPLQDAQGLFPELHHFLQG FVPQALRQAIK
Download sequence
Identical sequences	ENSCPOP00000012867 ENSCPOP00000012867 10141.ENSCPOP00000012867

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