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Domain assignment for ENSCPOP00000013300 from Cavia porcellus 76_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000013300
Domain Number 1 Region: 46-136
Classification Level Classification E-value
Superfamily Retrovirus capsid dimerization domain-like 1.79e-36
Family SCAN domain 0.0000652
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000013300   Gene: ENSCPOG00000014761   Transcript: ENSCPOT00000014906
Sequence length 333
Comment pep:known_by_projection scaffold:cavPor3:scaffold_14:28859218:28864207:1 gene:ENSCPOG00000014761 transcript:ENSCPOT00000014906 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MSAKLRESSTCLPQSPEDPDRFLIVKMEEEEQMCDPDSHLHQGSCYTPETCRLQFRQFGY
SDSSGPQGTLSQLRELCHHWLRPEVHTKEQILEMLVLEQFLAILPQELQACVKKHQPENG
EEAVTLLEELEREADQPDGQVIFARRKDMMAEKLAPWEITQEFPSSWLKPLKKQLQWASW
EPHSIRQHDEDTRTINVKSASRQKTSSDTELHSDVSNPLHMNAYQNFTSQGTWEQDGRFS
RRQENPARKKQNKKRQKAQTFLQYESMVIMDTRREGRISHVSITCLSAYCQKYVFSQLRR
HLTDSQYDNSIEGKRIYSSQTKLKCLQSLLGGR
Download sequence
Identical sequences 10141.ENSCPOP00000013300 ENSCPOP00000013300 ENSCPOP00000013300

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