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Domain assignment for ENSCPOP00000013994 from Cavia porcellus 76_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000013994
Domain Number 1 Region: 320-631
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 2.35e-60
Family Integrin alpha N-terminal domain 0.0000732
Further Details:      
 
Domain Number 2 Region: 123-349
Classification Level Classification E-value
Superfamily vWA-like 2.23e-51
Family Integrin A (or I) domain 0.000000459
Further Details:      
 
Domain Number 3 Region: 631-785
Classification Level Classification E-value
Superfamily Integrin domains 2.3e-28
Family Integrin domains 0.0045
Further Details:      
 
Domain Number 4 Region: 786-938
Classification Level Classification E-value
Superfamily Integrin domains 1.1e-21
Family Integrin domains 0.0049
Further Details:      
 
Domain Number 5 Region: 957-1112
Classification Level Classification E-value
Superfamily Integrin domains 0.00000000000785
Family Integrin domains 0.012
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000013994   Gene: ENSCPOG00000015518   Transcript: ENSCPOT00000015670
Sequence length 1180
Comment pep:known_by_projection scaffold:cavPor3:scaffold_4:46219921:46240335:1 gene:ENSCPOG00000015518 transcript:ENSCPOT00000015670 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
CGSPGAQSCASDLTVMSRTCTILLLFTALAASLGFNLDTQQMTDFHVDSPGFGHSVVQYT
NSRVMVGAPKEIKATNRTGGLYQCNYPTRRCEPVPLQVPPEAVNMSLGLSLAAATNPSQL
LACGPTVHQACRQNMYLMGLCFLLASPGQGSKKLPDSLQECPRQDHDIVFLIDGSGSITR
IDFTKMKSFVKSVMSQFQRPSTQVSLVQFSSRFQIHFTFKDFVSSSDPLGLVNSVSQLGG
YTHTATAIRNVVNQLFTTQNGARRDATKILIVITDGQKTGDALDYKDVIPMAEAAGIIRY
AIGVGSAFQHLTSRNELNWIASGSSYIFKVENFDALKAIQNQLKEKIFAIEGTQMVSSSS
FELEMSQEGFSAAFTPDGPVLGAVGSFDWSGGAFLYPPNGSPTFINMSQEHVDMRDSYLG
YATELALWKGVQSLVLGAPRHQHIGKVIIFIHATRQWRPQAEVTGTQIGSYFGASLCSVD
VDRDGITDLVLIGAPHYYEPTQGGQVSVCPLPKGRARWRCDALLQGEQGHPWGRFGAALT
VLGDVNGDKLTDVAIGAPGEEENQGAVYVFHGVSGQGISWAHSQRVTGSQLLPGLQHFGQ
SLSGGQDLTLDGLVDLAVGSQGHVLLLRTRPVLRVGVTMSFTRAEIPRSMFECQEQAASI
QDLGDAIVCFDIYESTKSRGGNLQSSVTFELTLDPGRLSPRATFKETNTRTLTRVQVFEL
SRHCETLQLLLRTCVEDSVTPITLRLNFSLEGNPIPSLGGLQPVLASDARTYFTASLPFE
KNCGDDHICQDDLAITFGFLGLKTLVVGSNLELNIEVTVSNDGEDSYGTTVTLFYPEGLS
YLRVARQQITINKKKEAKKNQQHLRSLRLTCDSAPNGGQAAWSTYCSINHLILPGGTQVS
LAPAPGPGAPPLLLVTANVSSENNTPRTSKTTFQLELPVKYAVYTVISSQEQSVKYLNFS
ASEEEGGSVAVHRYQVNNLGQRDLPVTVNFWVPVGLNGIATWAEMEVSHPQNPSIQCSSE
QLIPTEADFQTYLQKNPELDCSIADCLRFRCDVPSFGIQEELDFILKGNLSFGWVSQTLQ
KKVLVVSVAEITFNRSMYSQLPGQEAFLRAQMKTMLEKYEIHNPIPLIVGSCVGGLLLLA
LITASLYKVGFFKRQYKEMMEEANGQLVPEYETQDPQVVQ
Download sequence
Identical sequences 10141.ENSCPOP00000013994 ENSCPOP00000013994 ENSCPOP00000013994

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