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Domain assignment for ENSCPOP00000014204 from Cavia porcellus 76_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000014204
Domain Number 1 Region: 9-128,320-628
Classification Level Classification E-value
Superfamily Integrin alpha N-terminal domain 1.07e-64
Family Integrin alpha N-terminal domain 0.0000549
Further Details:      
 
Domain Number 2 Region: 148-343
Classification Level Classification E-value
Superfamily vWA-like 4.19e-52
Family Integrin A (or I) domain 0.0000000298
Further Details:      
 
Domain Number 3 Region: 914-1116
Classification Level Classification E-value
Superfamily Integrin domains 3.35e-34
Family Integrin domains 0.0037
Further Details:      
 
Domain Number 4 Region: 772-909
Classification Level Classification E-value
Superfamily Integrin domains 1.31e-27
Family Integrin domains 0.0023
Further Details:      
 
Domain Number 5 Region: 631-770
Classification Level Classification E-value
Superfamily Integrin domains 4.34e-17
Family Integrin domains 0.019
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000014204   Gene: ENSCPOG00000015751   Transcript: ENSCPOT00000015906
Sequence length 1162
Comment pep:known_by_projection scaffold:cavPor3:scaffold_29:8850213:8916274:-1 gene:ENSCPOG00000015751 transcript:ENSCPOT00000015906 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
GFLNCCLAYNVGLSEAKIFSGPSSEQFGYSVQQFINPKGNWILVGSPWSGFPENRMGDVY
KCPVDLSTATCEKLNLQTSTSIQNVTEVKTNMSLGLTLRRNTGTGGFLTCGPLWAQQCGS
QYYTTGVCCDISPDFQHLASFAPAIQTCPSFVDVVVVCDESNSIYPWEAVKNFLEKFVQG
LDIGPRKTQVALIQYANDPRVVYNLNTFKTKDEMIRATSQTYQAGGDLTNTFKAIQFART
NAYSAASGGRPGATKVMVVVTDGESHDGSMLKSVIEQCNNDNILRFGIAVLGYLNRNALD
TKNLIKEIKSIASIPTERFFFNVADEAALLEKAGTIGEHIFSIEGTVQGGENIQLEMSQV
GFSADYSPQNDILMLGAVGAFAWSGTIVQETAHGHTIFPKETFDQILQDRNHSSYLGYSV
AAISTEKSVYFVAGAPRANYTGQIILYNLDEHGNVTIIQTHRGDQIGSYFGSVLCSVDVN
KDTITDVLLVGAPTYMNDLKKEEGRVYLFTIAKGILNQHQFLEGPEGIENARFGSAIAAL
SDINMDGYNDVIVGSPLENQNSGAVYIYNGDQGTIRTKYSQKILGSDRAFRSQLQFFGRS
LDGYGDLNGDSITDVSIGAFGQVVQLWSQSIADVSVEASFNPEKIILFNKNAQIVLQLCF
RAKFRPTRQNSQVAITYNITLDADGYSSRVTSRGLFQENNERCLQKNMVLNVENRCTQHT
IQIQQKPSDVVNSLDLRVDISLENPGSSPALEAYSDTVKVFSIPFYKDCGGDGICISDLV
LDVQQLPATQKQSYIVSNQNKMLTFSVTLKNKGESAYNTAIVANFSENLFFASYSMPVDG
TEVICQVDSSQRSVTCDVGYPALKSKQQVTFTIHFDFNLQNLQNQASFSFQAFSESEEAN
KADNSVNLKIPLLYDAEIHLTRSTNINFYEVSSHKNVPSVVHYFEDIGPKFIFSLKVTTG
LVPVSMASVIIHIPQYTKEKNPLMYLTDIHTDQAGDISCSRINPLKLGQTSSSVSFKEEN
FRHVKRIVDCRTASCSDVICMFKNLDIKEEYFINVSTRIWSRDFRCKSTFQTVQLTAAAE
INTYNPEIYVIEENTVTIPLMIMKPNEKAEVPTGVIVGSVIAGILLLAALVSVLWRQRMS
KSSYEISPRNPDEMDESTELHS
Download sequence
Identical sequences ENSCPOP00000014204 ENSCPOP00000014204 10141.ENSCPOP00000014204

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