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Domain assignment for ENSCPOP00000015151 from Cavia porcellus 76_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000015151
Domain Number 1 Region: 2-96
Classification Level Classification E-value
Superfamily Tudor/PWWP/MBT 7.22e-30
Family PWWP domain 0.0000128
Further Details:      
 
Domain Number 2 Region: 444-522
Classification Level Classification E-value
Superfamily HIV integrase-binding domain 1.57e-29
Family HIV integrase-binding domain 0.00014
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000015151   Gene: ENSCPOG00000025432   Transcript: ENSCPOT00000026255
Sequence length 646
Comment pep:novel scaffold:cavPor3:scaffold_509:72991:88867:-1 gene:ENSCPOG00000025432 transcript:ENSCPOT00000026255 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
MPHAFKPGDLVFAKMKGYPHWPARIDDIADGAVKPPPNKYPIFFFGTHETAFLGPKDLFP
YDKCKDKYGKPNKRKGFNQGLWEIQNDPHASYSAPPPLSSSESEAPEADPAGGSDADEEE
DRSIMAVTAVTAAAASDRMESDSDSDKSSDNSGLKRKPSALKMSLSKRARKASSDRDRAS
VSPSEDENSESSSESEKTSDQDFTPEKKAVARAPRRGPLGGRRKKKVPSASDSDSKAGSD
GAKEGTLPAKKPPRGRKPAEKPPPKPRGRKPKPERPPSTSSSDSDSDEVDRISEWKRRED
DEPVKKRGRRPRTRSPKRTWRERLWPKEVGAMEAREGRTRLGTHGTFYCSREPARGAQKE
QCPSGSPLFVISSEPCSVPVPQGKKSTKKLPPQSAEPTRKPGQKEKRGRPEEKPRARPVK
VERTRKRSEGPPLDRRAEKKKEPSVEEKLQKLHSEVKFALKVDSPDVKRCLSALEELGTL
QVTSQILQKNTDVVATLKKIRRYKANKEVMEKAAEVYTRLKSRVLGPKLEAVQKASRAAR
PWVGGGSSAVRPGALGTAAPSSRAPTHLALEVSPPDLSAPVNGEATAPKEESVEDKEQED
GQDLEGGLRRSSSEDLHNDSLQEGPDLDRPGSERAQLDSESPDEES
Download sequence
Identical sequences 10141.ENSCPOP00000015151 ENSCPOP00000015151 ENSCPOP00000015151

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