SUPERFAMILY 1.75 HMM library and genome assignments server

SUPERFAMILY 2 can be accessed from supfam.org. Please contact us if you experience any problems.

Domain assignment for ENSCPOP00000017608 from Cavia porcellus 76_3

Domain architecture


Domain assignment details

(
show help)
Strong hits

Sequence:  ENSCPOP00000017608
Domain Number 1 Region: 623-907
Classification Level Classification E-value
Superfamily S-adenosyl-L-methionine-dependent methyltransferases 1.66e-41
Family C5 cytosine-specific DNA methylase, DCM 0.0063
Further Details:      
 
Domain Number 2 Region: 281-421
Classification Level Classification E-value
Superfamily Tudor/PWWP/MBT 1.75e-34
Family PWWP domain 0.0000181
Further Details:      
 
Weak hits

Sequence:  ENSCPOP00000017608
Domain Number - Region: 526-594
Classification Level Classification E-value
Superfamily FYVE/PHD zinc finger 0.000518
Family PHD domain 0.024
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

(show help)

Molecular Function IC (bits) H-Score
Cellular Component IC (bits) H-Score
Biological Process IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000017608   Gene: ENSCPOG00000020900   Transcript: ENSCPOT00000027061
Sequence length 909
Comment pep:known_by_projection scaffold:cavPor3:scaffold_18:7178460:7243568:-1 gene:ENSCPOG00000020900 transcript:ENSCPOT00000027061 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
LPAMPSSGPGDSSAPEREEDRKEGEEQEEPRSKEERQEPSATARKVGRPGRKRKHPPVES
SDTPKEPAVTSKSPSMAQDSGSSELLPNGDLEKRSEPQPEEGSPAGGQKGGAPAEGEGTA
ETPPEASRAVENGCCAPKEGRGASAEEGKEQKETNIESVKTEGSRGRLRGGLGWESSLRQ
RPMPRLTFQAGDPYYISKRKRDEWLARWKREAEKKAKVIAVMNAVEENPASGDSQKVEEA
SPPAVQQPTDPASPTVATTPEPVGADAGDKNATKAADDEPEYEDGRGFGIGELVWGKLRG
FSWWPGRIVSWWMTGRSRAAEGTRWVMWFGDGKFSVVCVEKLMPLSSFCSAFHQATYNKQ
PMYRKIYEVLQVASSRAGKLFPACHDSDESDTAKAVEVQNKQMIEWALGGFQPSGPKGLE
PPEEEKNPYKEVYTDMWVEPEAAAYAPPPPAKKPRKSTTEKPKVKEIIDERTRERLVYEV
RQKCRNIEDICISCGSLNVTLEHPLFIGGMCQNCKNCFLECAYQYDDDGYQSYCTICCGG
REVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGHKGTYGLLRRREDWPS
RLQMFFANNHDQEFDPPKVYPPVPAEKRKPIRVLSLFDGIATGLLVLKDLGIQVDRYIAS
EVCEDSITVGMVRHQGKIMYVGDVRSVTQKHIQEWGPFDLVIGGSPCNDLSIVNPARKGL
YEGTGRLFFEFYRLLHDARPKEGDDRPFFWLFENVVAMGVSDKRDISRFLESNPVMIDAK
EVSAAHRARYFWGNLPGMNRPLASTVNDKLELQECLEHGRIAKFSKVRTITTRSNSIKQG
KDQHFPVFMNEKEDILWCTEMERVFGFPVHYTDVSNMSRLARQRLLGRSWSVPVIRHLFA
PLKEYFACV
Download sequence
Identical sequences ENSCPOP00000017608 10141.ENSCPOP00000017608 ENSCPOP00000017608

Jump to [ Top of page · Domain architecture · Domain assignment details · Most Informative Gene Ontologies ]