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Domain assignment for ENSCPOP00000018395 from Cavia porcellus 76_3

Domain architecture


Domain assignment details

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Strong hits

Sequence:  ENSCPOP00000018395
Domain Number 1 Region: 355-453
Classification Level Classification E-value
Superfamily SRCR-like 6.8e-35
Family Scavenger receptor cysteine-rich (SRCR) domain 0.00019
Further Details:      
 
Weak hits

Sequence:  ENSCPOP00000018395
Domain Number - Region: 177-253
Classification Level Classification E-value
Superfamily tRNA-binding arm 0.0012
Family Seryl-tRNA synthetase (SerRS) 0.045
Further Details:      
 

Gene Ontology term assignment details

The top 10 most specific Gene Ontology terms for each namespace assigned to this domain architecture as determined by dcGO Predictor

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Biological Process IC (bits) H-Score
Cellular Component IC (bits) H-Score
Molecular Function IC (bits) H-Score

Protein sequence

External link(s) Protein: ENSCPOP00000018395   Gene: ENSCPOG00000022785   Transcript: ENSCPOT00000021828
Sequence length 455
Comment pep:known_by_projection scaffold:cavPor3:scaffold_36:2656969:2707700:-1 gene:ENSCPOG00000022785 transcript:ENSCPOT00000021828 gene_biotype:protein_coding transcript_biotype:protein_coding
Sequence
VFDSIMESRNIFLDHQEELDIYSDSVKFDARSMTALLPPNPKNGLQEKLKSFKAALIALY
LLVFVVLIPVISIVAAHLLKREMKNCTVGSPHASAMSQSLGKGNGSEDAMKFQEFVLEHI
SNIERRIQDISDAEASFIGSENFQNFSMTTDQRLNSVFLQLNNLVSSVQEHESAVDEISK
SLVSLNTTLLDLQLSIETLNKKVQETTLKQQEDISKLKEHVYNASAEIKSLKEEQEHIEE
EIKKELKVLNNVTNDLRLKDWEHSLTLRNITLIQGPPGPRGEKGDRGAPGQTGIPGLPGL
RGPPGLKGDRGVTGFPGSKGYPGPAGNVGRPGNPGQKGQKGEKGTGNLFHLPNVVRLVNG
KVPHEGRVEIFHEGIWGTICDDRWEIRVATVICRSLGYKGAKAVHKAAYFGQGTGPIWLN
EFCFGRESSIDQCNIRQWGVRSCTHSEDAGVTCAI
Download sequence
Identical sequences ENSCPOP00000018395 ENSCPOP00000018395 10141.ENSCPOP00000018395

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